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Table 5 Characteristics of the CDS, introns, and intergenic regions of D. pulex, D. melanogaster, and A. mellifera.

From: Genome-wide analysis of tandem repeats in Daphnia pulex - a comparative approach

  Daphnia pulex Drosophila melanogaster Apis mellifera
  CDS introns Intergenic CDS introns intergenic CDS introns intergenic
#sequences 120611 114156 36090 14817 47897 12371 31734 18117 23205
Min length 1 1 0 78 11 1 1 49 0
Max length 12685 48487 168617 69048 166135 345402 7242 34351 773536
Median length 147.0 76.0 1294.0 1152.0 75.0 1006.0 54.0 578.0 2986.0
Mean length 212.8 284.1 3659.1 1537.0 1080.0 5371.1 80.7 909.4 9007.8
SD lengths 279.0 1050.9 7082.0 1704.2 4197.7 13770.7 120.0 1245.9 22243.2
# positions 25665454 32436000 132056549 22774339 51727142 66445483 2561048 16475821 209026309
A 0.284 0.290 0.301 0.257 0.295 0.296 0.334 0.340 0.336
C 0.240 0.190 0.199 0.268 0.202 0.203 0.175 0.152 0.165
G 0.232 0.190 0.198 0.266 0.197 0.203 0.207 0.158 0.165
T 0.245 0.331 0.302 0.210 0.306 0.298 0.285 0.350 0.335
CG 0.472 0.380 0.397 0.534 0.399 0.406 0.381 0.310 0.329
corrected CpG 0.976 1.016 1.003 0.880 0.916 0.939 1.172 1.694 1.662
corrected CpNpG 1.088 1.082 1.063 1.086 1.068 1.099 1.005 0.962 0.959
A/T 1.157 0.875 0.999 1.225 0.967 0.995 1.174 0.970 1.000
C/G 1.034 0.997 1.002 1.005 1.023 1.001 0.844 0.963 1.000