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Table 1 Summary of read counts across different genomic locations.

From: A comparison of massively parallel nucleotide sequencing with oligonucleotide microarrays for global transcription profiling

  MCF-10a MCF-7_r1 MCF-7_r2
Total 286,197,907 302,129,896 150,762,975
After error filtering 173,966,873 205,050,087 113,512,672
Mappable 47,524,622 46,330,340 33,697,119
Uniquely mappable 28,371,318 28,882,179 22,223,910
Location    
   Ensembl known    
Total 21,709,397 22,031,344 16,980,001
Exon 15,996,190 17,439,762 12,800,399
Intron 5,713,207 4,591,582 4,179,602
   All annotation1 24,037,188 23,854,633 18,830,788
   Exon Junctions    
Known 1,010,785 1,225,448 -
Putative 16,548 23,540 -
  1. 1Known, predicted and EST transcripts