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Figure 6 | BMC Genomics

Figure 6

From: Variable structure motifs for transcription factor binding sites

Figure 6

p53 results. Top: ROC curves for cross-validation on p53 data set using random genomic sequences as counter-examples. Bottom: A known TRANSFAC motif for p53 and the motifs our gapped method and MEME found. Using our method, 3% of the sites discovered had an optional spacer between the 2 half-sites. This is a close fit to Wei et al.'s analysis. They found 236 sites without a spacer and 27 that had a 1 base pair spacer.

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