Clone | F | Log 2 F ± SD | P | GenBank GSS | e-value | Def. | Id. | Annotated Gene Function (GO terms in Figure S4., additional file 4) | qRT-PCR | ||
---|---|---|---|---|---|---|---|---|---|---|---|
Fw | Rv | +/- | F ± SD | ||||||||
Lin1G8 | -1.80 | -0.8 ± 0.1 | 0.009 | GS598905 | 5e-35 | 8e-31 | B | LinJ22_V3.1340 | Serine/threonine protein phosphatase, putative (dTPS6) | N.D. | |
Lin4F4 | -2.27 | -1.2 ± 0.3 | 0.016 | GS598906 | 0 | 0 | a | LinJ31_V3.0430 | Cysteine peptidase, Clan CA, family C2, putative (dTPS0) | + | -3.3 ± 0.1 |
Lin9B9 | -1.71 | -0.8 ± 0.2 | 0.015 | GS598907 | 5e-26 | 0 | a | LinJ36_V3.1010 | Dynein heavy chain, putative (dTPS0) | N.D. | |
Lin15D6 | -2.05 | -1.0 ± 0.2 | 0.042 | GS598908 | 0 | 0 | a | LinJ31_V3.0610 | Amino acid transporter aATP11, putative (dTPS0) | N.D. | |
Lin22B1* | -2.03 | -1.0 ± 0.2 | 0.016 | GS598909 | 0 | 0 | a | LinJ23_V3.1400 | Coronin, putative (dTPS0) | + | -4.9 ± 0.7 |
Lin21H10 | -1.90 | -0.9 ± 0.1 | 0.001 | GS598910 | 0 | 0 | b | LinJ26_V3.1670 | Sphingolipid delta-4 desaturase, putative (dTPS22) | N.D. | |
Lin24E10* | -1.80 | -0.8 ± 0.3 | 0.038 | GS598911 | 0 | 0 | b | LinJ22_V3.1310 | I/6 autoantigen-like protein (dTPS0) | + | -6.7 ± 0.9 |
Lin27B2 | -1.80 | -0.8 ± 0.3 | 0.034 | GS598912 | 0 | - | c | LinJ35_V3.1230 | Short chain dehydrogenase, putative (dTPS1, dTPS7) | + | -3.2 ± 0.7 |
Lin28C5 | -1.81 | -0.9 ± 0.1 | 0.005 | GS598913 | 0 | 2e-154 | b | LinJ26_V3.1670 | Sphingolipid delta-4 desaturase, putative (dTPS22) | N.D. | |
Lin31H9* | -1.94 | -1.0 ± 0.1 | 0.006 | GS598914 | 0 | 0 | b | LinJ26_V3.1000 | Dynein heavy chain, putative (dTPS0) | + | -6.2 ± 0.8 |
Lin36A9* | -2.15 | -1.1 ± 0.2 | 0.009 | GS598915 | 0 | 0 | b | LinJ26_V3.1000 | Dynein heavy chain, putative (dTPS0) | + | -6.2 ± 0.8 |
Lin40G12* | -1.92 | -0.9 ± 0.2 | 0.013 | GS598916 | 2e-161 | 0 | b | LinJ23_V3.1560 | Lathosterol oxidase-like protein (dTPS28, dTPS30) | + | -14.3 ± 1.7 |
Lin47D8 | -4.00 | -2.0 ± 0.5 | 0.023 | GS598917 | 0 | 0 | a | LinJ06_V3.1330 | Coproporphyrinogen III oxidase, putative (dTPS33) | + | -5.8 ± 0.1 |
LinJ06_V3.1340 | Protoporphyrinogen oxidase-like protein (dTPS13, dTPS32) | + | -2.2 ± 0.4 | ||||||||
Lin49B7 | -4.38 | -2.1 ± 0.0 | 0.000 | GS598918 | 0 | 4e-64 | a | LinJ34_V3.4160 | Phosphatidylinositol-3-kinase (tor2)-like protein (dTPS0) | N.D. | |
Lin50H7 | -2.32 | -1.2 ± 0.1 | 0.005 | GS598919 | 7e-164 | 0 | b | LinJ28_V3.2380 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase-like protein (dTPS9, dTPS35) | + | -3.4 ± 0.3 |
LinJ28_V3.2390 | Cyclin dependent kinase-binding protein, putative (dTPS0) | + | -127.4 ± 7.4 | ||||||||
Lin60B1* | -3.84 | -1.9 ± 0.1 | 0.001 | GS598920 | 0 | 0 | c | LinJ31_V3.2370 | 3'-nucleotidase/nuclease, putative (dTPS4, dTPS29) | + | -4.6 ± 0.4 |
Lin60E5 | -1.80 | -0.8 ± 0.3 | 0.035 | GS598921 | 0 | 0 | b | LinJ26_V3.0970 | Hypothetical protein, conserved/HPB (dTPS5, dTPS16) | N.D. | |
Lin63F3 | -2.95 | -1.6 ± 0.4 | 0.018 | GS598922 | 0 | 0 | b | LinJ36_V3.6550 | Glucose transporter lmgt2, putative (dTPS47) | + | -8.1 ± 1.1 |
LinJ36_V3.6560 | Glucose transporter, putative (dTPS47) | + | -6.3 ± 1.4 | ||||||||
Lin66F10 | -2.18 | -1.1 ± 0.0 | 0.000 | GS598923 | 0 | 0 | b | LinJ36_V3.6550 | Glucose transporter lmgt2, putative (dTPS47) | + | -8.1 ± 1.1 |
LinJ36_V3.6560 | Glucose transporter, putative (dTPS47) | + | -6.3 ± 1.4 | ||||||||
Lin80B3 | -2.06 | -1.0 ± 0.3 | 0.024 | GS598924 | 0 | 0 | b | LinJ28_V3.3250 | Glucose-6-phosphate-N-acetyltransferase, putative (dTPS46) | N.D. | |
Lin82C6 | -1.74 | -0.8 ± 0.3 | 0.038 | GS598925 | 0 | - | c | LinJ31_V3.0440 | Cysteine peptidase, Clan CA, family C2, putative (dTPS0) | + | -3.3 ± 0.1 |
Lin84E8 | -2.26 | -1.2 ± 0.2 | 0.007 | GS598926 | 0 | 0 | a | LinJ31_V3.2370 | 3'-nucleotidase/nuclease, putative (dTPS4, dTPS29) | + | -4.6 ± 0.4 |
LinJ31_V3.2380 | 3'-nucleotidase/nuclease precursor, putative (dTPS4, dTPS29) | + | -2.7 ± 0.6 | ||||||||
Lin86H3 | -2.17 | -1.1 ± 0.1 | 0.004 | GS598927 | 0 | 8e-130 | b | LinJ31_V3.0950 | Sodium stibogluconate-resistance protein, putative (dTPS) | N.D. | |
Lin89F9 | -2.93 | -1.6 ± 0.4 | 0.026 | GS598928 | 0 | 0 | b | LinJ31_V3.2370 | 3'-nucleotidase/nuclease, putative (dTPS4, dTPS29) | + | -4.6 ± 0.4 |
LinJ31_V3.2380 | 3'nucleotidase/nuclease precursor, putative (dTPS4, dTPS29) | + | -2.7 ± 0.6 | ||||||||
LinJ31_V3.2390 | Helicase-like protein | N.D. | |||||||||
Lin92D7* | -2.27 | -1.2 ± 0.2 | 0.005 | GS598929 | 0 | 0 | b | LinJ31_V3.2370 | 3'-nucleotidase/nuclease, putative (dTPS4, dTPS29) | + | -4.6 ± 0.4 |
LinJ31_V3.2380 | 3'-nucleotidase/nuclease precursor, putative (dTPS4, dTPS29) | + | -2.7 ± 0.6 | ||||||||
Lin92G9 | -2.29 | -1.2 ± 0.1 | 0.004 | GS598930 | 0 | 0 | a | LinJ06_V3.1320 | Pteridine transporter, putative (dTPS0) | + | -2.1 ± 0.3 |
LinJ06_V3.1330 | Coproporphyrinogen III oxidase, putative (dTPS33) | + | -5.8 ± 0.1 | ||||||||
Lin97D1 | -11.57 | -3.5 ± 0.2 | 0.001 | GS598931 | 0 | 0 | a | LinJ06_V3.1320 | Pteridine transporter, putative (dTPS0) | + | -2.1 ± 0.3 |
Lin97F6 | -1.80 | -0.8 ± 0.3 | 0.029 | GS598932 | 0 | 0 | b | LinJ26_V3.0460 | Hypothetical protein, conserved | N.D. | |
Lin98C7* | -2.12 | -1.1 ± 0.5 | 0.044 | GS598933 | 0 | 0 | b | LinJ31_V3.2370 | 3'-nucleotidase/nuclease, putative (dTPS4, dTPS29) | + | -4.6 ± 0.4 |
LinJ31_V3.2380 | 3'nucleotidase/nuclease precursor, putative (dTPS4, dTPS29) | + | -2.7 ± 0.6 | ||||||||
Lin98F9 | -2.43 | -1.3 ± 0.3 | 0.016 | GS598934 | 2e-190 | 1e-101 | b | LinJ32_V3.3120 | Minichromosome maintenance (MMC) complex subunit, putative (dTPS8, dTPS38, dTPS48) | N.D. | |
Lin98G10* | -2.13 | -1.1 ± 0.2 | 0.015 | GS598935 | 0 | 0 | b | LinJ30_V3.2780 | Superoxide dismutase, putative (dTPS0) | + | -3.7 ± 0.1 |
Lin101B5 | -2.62 | -1.4 ± 0.3 | 0.011 | GS598936 | 0 | 0 | b | LinJ09_V3.0650 | Serine peptidase family S51, peptidase E, putative (dTPS19) | N.D. | |
Lin105A3 | -2.22 | -1.1 ± 0.1 | 0.005 | GS598937 | 0 | 0 | b | LinJ36_V3.1320 | Fructose-1,6-bisphosphate aldolase (dTPS37) | N.D. | |
Lin105B9 | -6.13 | -2.6 ± 0.2 | 0.001 | GS598938 | 0 | 0 | a | LinJ06_V3.1320 | Pteridine transporter, putative (dTPS0) | + | -2.1 ± 0.3 |
Lin109F4 | -3.16 | -1.7 ± 0.5 | 0.024 | GS598939 | 0 | 0 | a | LinJ06_V3.1330 | Coproporphyrinogen III oxidase, putative (dTPS33) | + | -5.8 ± 0.1 |
LinJ06_V3.1340 | Protoporphyrinogen oxidase-like protein (dTPS13, dTPS32) | + | -2.2 ± 0.4 | ||||||||
Lin111C2 | -3.14 | -1.7 ± 0.1 | 0.001 | GS598940 | 0 | 0 | b | LinJ09_V3.0650 | Serine peptidase family S51, peptidase E, putative (dTPS19) | N.D. | |
Lin111F3 | -2.09 | -1.1 ± 0.4 | 0.035 | GS598941 | 0 | 0 | a | LinJ31_V3.2210 | Prostaglandin F2α synthetase (dTPS31) | N.D. | |
Lin125H5 | -1.95 | -1.0 ± 0.2 | 0.022 | GS598942 | 0 | 0 | b | LinJ36_V3.1590 | Serine/threonine protein kinase, putative (dTPS43) | N.D. | |
Lin144F11 | -2.28 | -1.2 ± 0.1 | 0.004 | GS598943 | 0 | 0 | a | LinJ31_V3.2210 | Prostaglandin F2α synthetase (dTPS31) | N.D. | |
Lin144H10 | -1.85 | -0.9 ± 0.1 | 0.007 | GS598944 | 0 | 0 | a | LinJ22_V3.1300 | Cyclophilin, putative (dTPS0) | + | -4.1 ± 0.6 |
LinJ19_V3.1310 | I/6-autoantigen-like protein (dTPS0) | N.D. | |||||||||
Lin144H11 | -2.32 | -1.2 ± 0.1 | 0.003 | GS598945 | 0 | 0 | b | LinJ36_V3.2700 | Membrane-bound acid phosphatase precursor (dTPS42) | N.D. | |
Lin150E4 | -1.86 | -0.9 ± 0.4 | 0.048 | GS598946 | 0 | 0 | b | LinJ13_V3.1060 | Calmodulin, putative (dTPS16) | N.D. | |
Lin153D1 | -1.80 | -0.8 ± 0.1 | 0.002 | GS598947 | 0 | 0 | b | LinJ27_V3.0530 | Amino acid permease, putative (dTPS26) | N.D. | |
Lin155H12 | -2.52 | -1.3 ± 0.4 | 0.024 | GS598948 | 0 | 0 | a | LinJ36_V3.0250 | Peptidyl-prolyl cis-trans isomerase, putative (dTPS18, dTPS25) | N.D. | |
Lin157D8 | -2.78 | -1.5 ± 0.2 | 0.005 | GS598949 | 0 | 0 | b | LinJ31_V3.2370 | 3'-nucleotidase/nuclease, putative (dTPS4, dTPS29) | + | -4.6 ± 0.4 |
Lin158A10 | -2.40 | -1.3 ± 0.2 | 0.008 | GS598950 | 0 | 0 | b | LinJ23_V3.0870 | Hypothetical protein, conserved | N.D. | |
Lin177E10 | -1.72 | -0.8 ± 0.3 | 0.042 | GS598951 | 7e-167 | 0 | b | LinJ16_V3.0600 | Histone H3, putative (dTPS8) | N.D. | |
LinJ16_V3.0610 | Histone H3, putative (dTPS8) | N.D. | |||||||||
Lin182F2 | -2.18 | -1.1 ± 0.3 | 0.022 | GS598952 | 0 | 0 | b | LinJ25_V3.0740 | Eukaryotic initiation factor 5a, putative (dTPS15) | N.D. | |
LinJ25_V3.0750 | Eukaryotic initiation factor 5a, putative (dTPS15) | N.D. | |||||||||
Lin187C10 | -4.02 | -2.0 ± 0.3 | 0.003 | GS598953 | 0 | 0 | b | LinJ06_V3.1320 | Pteridine transporter, putative (dTPS0) | + | -2.1 ± 0.3 |
Lin193E6 | -2.00 | -1.0 ± 0.4 | 0.040 | GS598954 | 0 | 0 | b | LinJ23_V3.1230 | SHERP (dTPS0) | N.D. | |
Lin194A4 | -1.70 | -0.8 ± 0.2 | 0.016 | GS598955 | 0 | 1e-11 | b | LinJ22_V3.1270 | Aquaporin, putative (dTPS3) | N.D. | |
Lin197D2* | -3.32 | -1.7 ± 0.3 | 0.007 | GS598956 | 0 | 0 | b | LinJ07_V3.0150 | Acyl-CoA dehydrogenase, mitochondrial precursor, putative (dTPS21, dTPS27) | + | -2.4 ± 0.2 |
LinJ07_V3.0170 | Maoc family protein | - | -1.1 ± 0.3 | ||||||||
Lin206C10* | -1.99 | -1.0 ± 0.3 | 0.032 | GS598957 | 6e-69 | 1e-82 | b | LinJ07_V3.0940 | Cytochrome b5-like protein (dTPS0) | + | -1.7 ± 0.0 |
Lin206H7* | -1.90 | -0.9 ± 0.2 | 0.015 | GS598958 | 0 | 0 | b | LinJ31_V3.1240 | Vacuolar-type proton translocating pyrophosphatase 1, putative (dTPS0) | + | -3.4 ± 0.7 |
Lin208F2* | -2.10 | -1.1 ± 0.3 | 0.026 | GS598959 | 2e-86 | 3e-64 | b | LinJ31_V3.1240 | Vacuolar-type proton-translocating pyrophosphatase 1, putative | + | -3.4 ± 0.7 |
Lin208H10 | -2.68 | -1.4 ± 0.4 | 0.010 | GS598960 | 0 | 0 | a | LinJ18_V3.1070 | Cysteine peptidase, Clan CA, family C2, putative (dTPS0) | + | -3.3 ± 0.1 |
LinJ18_V3.1080 | Vacuolar protein sorting complex subunit, putative (dTPS 0) | - | -1.2 ± 0.3 | ||||||||
Lin219A10* | -1.89 | -0.9 ± 0.1 | 0.004 | GS598961 | 0 | 0 | b | LinJ19_V3.0710 | Glycosomal malate dehydrogenase (dTPS1, dTPS30) | + | -2.3 ± 0.0 |
Lin228D4* | -1.86 | -0.9 ± 0.2 | 0.014 | GS598962 | 0 | 0 | a | LinJ19_V3.0090 | Fibrillarin, putative (dTPS0) | + | -4.1 ± 0.8 |
Lin229E6 | -9.63 | -3.3 ± 0.2 | 0.002 | GS598963 | 0 | 0 | a | LinJ06_V3.1320 | Pteridine transporter, putative (dTPS0) | + | -2.1 ± 0.3 |
LinJ06_V3.1330 | Coproporphyrinogen III oxidase, putative (dTPS33) | + | -5.8 ± 0.1 | ||||||||
Lin231G4 | -1.73 | -0.8 ± 0.2 | 0.013 | GS598964 | 0 | 0 | b | LinJ31_V3.1240 | Vacuolar-type proton translocating pyrophosphatase 1, putative (dTPS0) | + | |
LinJ31_V3.1250 | Hypothetical protein, unknown function | N.D. | |||||||||
Lin234C9 | -1.77 | -0.8 ± 0.3 | 0.038 | GS598965 | 0 | 0 | b | LinJ20_V3.1220 | Cysteine peptidase, Clan CA, family C2, putative (dTPS41) | + | -3.3 ± 0.1 |
Lin242E2 | -2.85 | -1.5 ± 0.4 | 0.025 | GS598966 | 0 | 0 | b | LinJ31_V3.2370 | 3'-nucleotidase/nuclease, putative (dTPS4, dTPS29) | + | -4.6 ± 0.4 |
LinJ31_V3.2380 | 3'-nucleotidase/nuclease precursor, putative (dTPS4, dTPS29) | + | -2.7 ± 0.6 | ||||||||
Lin252B11 | -2.12 | -1.1 ± 0.3 | 0.028 | GS598967 | 0 | 0 | b | LinJ17_V3.170/200 | Elongation factor 1αg(dTPS14, dTPS39, dTPS44p | N.D. | |
Lin265E2 | -1.89 | -0.9 ± 0.3 | 0.042 | GS598968 | 1e-165 | 0 | b | LinJ29_V3.1880 | Paraflagellar rod protein 1D, putative (dTPS0) | N.D. | |
Lin270H10* | -1.96 | -1.0 ± 0.2 | 0.010 | GS598969 | 0 | 0 | b | LinJ31_V3.1150 | Monoglyceride lipase, putative (dTPS0) | + | -1.9 ± 0.0 |
Lin271C2* | -1.9 | -0.9 ± 0.3 | 0.043 | GS598970 | 0 | 0 | b | LinJ28_V3.0090 | Adenylate cyclase-like protein (dTPS9, dTPS12, dTPS23, dTPS24) | + | -2.3 ± 0.0 |
Lin285H1 | -2.12 | -1.1 ± 0.2 | 0.012 | GS598971 | 0 | 0 | b | LinJ36_V3.6550 | Glucose transporter lmgt2, putative (dTPS47) | + | -8.1 ± 1.1 |
LinJ36_V3.6560 | Glucose transporter, putative (dTPS47) | + | -6.3 ± 1.4 | ||||||||
Lin294G4* | -2.00 | -1.0 ± 0.2 | 0.013 | GS598972 | 0 | 0 | b | LinJ31_V3.1640 | Dipthine synthase, putative | - | |
LinJ31_V3.1660 | Putative 3-ketoacyl-CoA thiolase-like protein (dTPS0) | + | -3.6 ± 0.5 |