Table 2 Selected differentially expressed proteins detected in Cr(VI)-challenged M9L-grown F1
From: Proteomics reveals a core molecular response of Pseudomonas putida F1 to acute chromate challenge
Gene ID | Functional category | Protein function | Poisson regression coefficient | FDR |
|---|---|---|---|---|
Pput 0191 | Inorganic ion transport and metabolism | ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein | 26.45 | 3.65E-14 |
Pput 0190 | Secondary metabolites biosynthesis | Taurine dioxygenase | 25.54 | 2.01E-15 |
Pput 4621 | none | hypothetical protein | 25.52 | 8.56E-06 |
Pput 1872 | Cell Motility | methyl-accepting chemotaxis sensory transducer | 24.87 | 2.68E-03 |
Pput 0391 | Coenzyme transport and metabolism | biotin biosynthesis protein BioC | 24.69 | 8.28E-07 |
Pput 3604 | Unknown Function | protein of unknown function DUF1653 | 24.67 | 7.60E-03 |
Pput 1104 | Transcription | transcriptional regulator, LysR family | 24.67 | 7.60E-03 |
Pput 2545 | Transcription | transcriptional regulator, LysR family | 24.67 | 7.60E-03 |
Pput 2963 | Replication | ATPase involved in DNA repair-like protein | 24.67 | 7.60E-03 |
Pput 4712 | Post translational modification and protein turnover chaperones | band 7 protein | 24.67 | 7.60E-03 |
Pput 1882 | Amino acid transport and metabolism | ABC transporter related | 24.67 | 1.80E-04 |
Pput 1060 | Carbohydrate transport and metabolism | glucose-6-phosphate 1-dehydrogenase | 24.25 | 3.38E-10 |
Pput 0247 | Inorganic ion transport and metabolism | ABC transporter related | 24.11 | 4.50E-03 |
Pput 0999 | Secondary metabolites biosynthesis | Mammalian cell entry related domain protein | 23.78 | 4.50E-03 |
Pput 4172 | Replication | Ribonuclease H | 23.78 | 4.50E-03 |
Pput 3319 | none | fatty acid cistrans isomerase | 23.78 | 4.50E-03 |
Pput 0949 | Energy production and conversion | protein of unknown function DUF1111 | 23.78 | 4.50E-03 |
Pput 4281 | Coenzyme transport and metabolism | putative methyltransferase | 23.78 | 4.50E-03 |
Pput 3991 | Cell wall membrane and envelope biogenesis | MscS Mechanosensitive ion channel | 23.78 | 4.50E-03 |
Pput 5174 | Replication | ATP-dependent DNA helicase Rep | 23.78 | 4.50E-03 |
Pput 2568 | Amino acid transport and metabolism | FAD dependent oxidoreductase | -22.82 | 2.99E-07 |
Pput 1812 | General function prediction | alpha/beta hydrolase fold | -23.83 | 2.79E-03 |
Pput 4237 | Amino acid transport and metabolism | spermidine/putrescine ABC transporter ATPase subunit | -23.94 | 7.11E-29 |
Pput 2061 | Inorganic ion transport and metabolism | catalase/peroxidase HPI | -24.23 | 2.03E-04 |
Pput 1736 | Energy production and conversion | proton-translocating NADH-quinone oxidoreductase, chain L | -24.31 | 1.13E-12 |
Pput 0594 | Energy production and conversion | Pyruvate dehydrogenase (acetyl-transferring) | -24.40 | 1.48E-14 |
Pput 3083 | Energy production and conversion | aldehyde dehydrogenase | -24.55 | 5.31E-03 |
Pput 0110 | General function prediction | Carbonic anhydrase/acetyltransferase isoleucine patch superfamily-like protein | -24.82 | 5.31E-03 |
Pput 4889 | Amino acid transport and metabolism | phosphoribosyl-ATP pyrophosphohydrolase | -24.82 | 1.47E-03 |
Pput 0527 | Amino acid transport and metabolism | L-seryl-tRNA(Sec) selenium transferase | -25.04 | 3.99E-04 |
Pput 4915 | Carbohydrate transport and metabolism | glycogen/starch/alpha-glucan phosphorylase | -25.23 | 2.03E-04 |
Pput 1789 | None | hypothetical protein | -25.31 | 5.33E-06 |
Pput 0932 | General function prediction | intracellular protease, PfpI family | -25.63 | 2.52E-06 |
Pput 2569 | None | hypothetical protein | -25.68 | 2.52E-06 |
Pput 4267 | General function prediction | transferase hexapeptide repeat containing protein | -25.68 | 2.52E-06 |
Pput 1947 | Energy production and conversion | cytochrome c, class I | -25.68 | 1.31E-06 |
Pput 2567 | Amino acid transport and metabolism | extracellular solute-binding protein, family 1 | -25.74 | 7.04E-08 |
Pput 2463 | Cell wall membrane and envelope biogenesis | GCN5-related N-acetyltransferase | -25.92 | 3.86E-09 |
Pput 0592 | Energy production and conversion | alpha/beta hydrolase fold | -26.07 | 1.94E-09 |
Pput 1187 | None | hypothetical protein | -26.11 | 3.65E-14 |