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Table 2 Pairs (and one triplet) of possibly recently-transposed EhSINE1s.

From: Bioinformatic analysis of Entamoeba histolytica SINE1 elements

Set SINE Location Length (bp) Or. Repeats TSD length (bp)
A EhSINE1_1 gi|169801175|gb|DS571347.1| 7763-8309 547 + 2 29
A EhSINE1_2 gi|169801175|gb|DS571347.1| 2150-2696 547 + 2 11
B EhSINE1_15 gi|169802311|gb|DS571190.1| 67757-68303 547 + 2 21
B EhSINE1_6 gi|169800595|gb|DS571494.1| 2811-3357 547 + 2 29
B* EhSINE1_230 gi|169803070|gb|DS571147.1| 112278-111732 547 - 2 25
E* EhSINE1_206 gi|169800562|gb|DS571508.1| 4500-3954 547 - 2 21
E EhSINE1_18 gi|169801330|gb|DS571317.1| 27553-28099 547 + 2 24
F* EhSINE1_207 gi|169801573|gb|DS571277.1| 39116-38571 546 - 2 24
F EhSINE1_34 gi|169799366|gb|DS572252.1| 2-548 547 + 2 N/A#
G EhSINE15_42 gi|169800336|gb|DS571597.1| 8573-9089 517 + 1 26
G* EhSINE1_248 gi|169800938|gb|DS571399.1| 19037-18521 517 - 1 16
J EhSINE1_149 gi|169801894|gb|DS571234.1| 34641-35201 561 + None 8
J EhSINE1_341 gi|169801894|gb|DS571234.1| 29270-28710 561 - None 0
O* EhSINE1_224 gi|169800830|gb|DS571423.1| 1030-483 548 + 2 13
O EhSINE1_219 gi|169798957|gb|DS572593.1| 697-150 548 + 2 24
P EhSINE1_232 gi|169801851|gb|DS571240.1| 35235-34688 548 + 2 15
P* EhSINE1_236 gi|169801851|gb|DS571240.1| 22360-21813 548 + 2 21
  1. * 99% identical to other member(s) of the set; otherwise 100%
  2. # Not available; no flanking sequence available at 5' end to assess TSD length. But this pair qualifies for inclusion as the 3' flanks are not similar