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Table 2 Repeats of length 18 with each of the six possible protein translations

From: Database of exact tandem repeats in the Zebrafish genome

GP

Repeat Base

Possible Protein Translations

#

1

ACCCTCCAGAGCTGCCAG

PPELPD

VWQLWR

PSRAAR

LQSCQT

GLAALE

GSSGGS

10

1

AGCTCTGGAGGGTCTGGC

PPELPD

VWQLWR

PSRAAR

LQSCQT

GLAALE

GSSGGS

3

1

ACTGGAGGGTCTGGCAGC

PPVLPD

VWQHWR

PSSAAR

LQCCQT

ALEGLA

GSTGGS

1

1

AGCTCTGGCGGGTCTGGC

PPELPD

VWQLWR

PARAAR

RQSCQT

GLAALA

SGSSGG

1

1

ACCCTCCAGTGCTGCCAG

PPVLPD

VHQHWR

PSSAAR

LQCCQT

GLAALE

SGSTGG

2

1

ACCCGCCAGAGCTGCCAG

PPELPD

VWQLWR

PARAAR

RQSCQT

GLAALA

GSSGGS

1

2

ACGCCGCAGCCAGAGTCG

CGVDSG

AASTLA

RRRLWL

ARVDAA

QPESTP

SQSRRR

1

3

ATCGTGGCCCCCTCGTCC

RPSWPP

VHRGPL

SIVAPS

RGPRWT

RGGHDG

EGATMD

1

4

CCCTGTGGTGCTGTGTGT

CGAVCP

VVLCVP

WCCVSL

GTHSTT

QGHTAP

RDTQHH

1

  1. GP: grouping; #: number of instances found in the Zv8 assembly. Note the repeat base has been reordered by lexicographical order.