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Table 3 Repeats of length 24 with each of the six possible protein translations

From: Database of exact tandem repeats in the Zebrafish genome

GP

Repeat Base

Possible Protein Translations

#

1

ACGCTCCAGGCCCTCCGCAGCTCC

PGPPQLHA

AWSCGGPG

SRPSAAPR

QALRSSTL

ERGAAEGL

SVELRRAW

6

1

AGCGTGGAGCTGCGGAGGGCCTGG

PGPPQLHA

AWSCGGPG

SRPSAAPR

QALRSSTL

ERGAAEGL

SVELRRAW

4

1

ACGCCCCAGGCCCTCCGCAGCTCC

PGPPQLHA

AWSCGGPG

PRPSAAPR

QALRSSTP

GRGAAEGL

GVELRRAW

1

1

AGCTGCGGAGGGCCTGGGGCGTGG

PGPPQLHA

AWSCGGPG

PRPSAAPR

QALRSSTP

LRGAAELG

GVELRRAW

1

1

ACGCTCCAGGCCCTCGGCAGCTGC

PGPRQLHA

TLQALGSC

SRPSAAAR

GACSCRGP

ERAAAELG

SVQLPRAW

1

2

AAGCCCGAGGCGACGCCATTGGAG

GLLQWRRL

EATPLEKP

RRRHWRSP

GDAIGEAR

SGFSNGVA

RASPMASP

1

2

AAGGCCGAGGCGACGCCATTGGAG

GLLQWRRL

EATPLEKA

RRRHWRRP

GDAIGEGR

SAFSNGVA

MASPRPSP

1

3

AAGCGGATTTTTGACGCGCGAGTG

*SGFLTRE

EADF*RAS

KRIFDARV

LARQKSAS

HSRVKNPL

TRASKIRF

1

4

AAGCGCCGGTGAGCCCTCGCCCTC

ALEGEGSP

RLRARAHR

A*GRGLTG

R*ALALKR

AGEPSPSS

PVSPRPQA

1

5

AAGCTCAGGCGGCGGCCATTCAGG

GGGHSGSS

AAAIQEAQ

RRPFRKLR

*AS*MAAA

PELPEWPP

LSFLNGRR

1

  1. GP: grouping; #: number of instances found in the Zv8 assembly. Note the repeat base has been reordered by lexicographical order.