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Table 1 EST sequences and assembly statistics for two suppression subtractive hybridization libraries constructed from spleen cDNA of Asian seabass

From: Identification and analysis of immune-related transcriptome in Asian seabass Lates calcarifer

 

Forward subtractive

library

Reverse subtractive library

Sequences combined

Total number of sequences

1527

1824

3351

Clean sequences (>100 bp)

1168

1719

2887

Low quality sequences

359

105

464

Total number of unique sequences

761

1093

1692

Singlets

588

797

1207

Contigs

173

296

485

   2 ESTs

118

196

292

   3-4 ESTs

41

72

130

   ≥5 ESTs

14

28

63

SNP-contained contigs

--

--

303

Microsatellite -contained unique sequences (≥8 repeats)

--

--

20