Skip to main content

Table 2 Description of matches with glycine-rich proteins present in the Arachnida protein database for transcripts from A. cajennense, R. sanguineus and R. microplus

From: The expression of genes coding for distinct types of glycine-rich proteins varies according to the biology of three metastriate ticks, Rhipicephalus (Boophilus) microplus, Rhipicephalus sanguineus and Amblyomma cajennense

Best Match to Arachnida Database Accession number of Best Match Size (amino acid) % Glycine of Best match Library Transcript name (Number of ESTs) % Glycine in respective transcript* E-value of Match
cement-like antigen [H. longicornis] gi 116642505 179 34,63 SGFAc Ac147 (1) 28,81 9E-005
     SGFRs Rs345 (1) 21,78 5E-009
     SGFRm Rm62 (1) 21,11 5E-009
     SGFRm Rm115 (2) 22,91 1E-011
     SGFRm Rm 519 (1) 23,37 3E-007
     SGFRm Rm61 (3) 32,2 1E-020
cement-like antigen [H. longicornis] gi 125597020 217 38,7 SGFRm Rm265 (1) 22,22 1E-009
     SGFRm Rm71 (1) 41,32 1E-017
     SGFRm Rm470 (1) 31,79  
NPL-2 [I. pacificus] gi 51011404 78 38,46 SGFRm Rm234 (1) 21,35 1E-006
putative cement protein [I. scapularis] gi 50363174 119 50,42 SGFRm Rm388 (1) 20,43 5E-007
putative cement protein RIM36 [R. appendiculatus] gi 21885262 334 24,55 SGFAc Ac52 (2) 20,57 8E-024
     SGFRm Rm77 (1) 25,82 2E-009
salivary gland-associated protein 64P [R. appendiculatus] gi 20069012 154 29,22 SGFAc Ac109 (1) 20 4E-012
     SGFRs Rs12 (13) 30,43 1E-025
Unknown [R.haemaphysaloides] gi 45479213 506 25,29 SGFAc Ac9 (10) 24,8 2E-028
     SGFRs Rs17 (5) 22,05 1E-149
     SGFRs Rs19 (1) 20,31 7E-062
     SGFRs Rs20 (1) 21,1 3E-082
     SGFRs Rs156 (1) 30,37 1E-020
     SGFRs Rs402 (1) 25,77 2E-028
     SGFRs Rs428 (1) 30,72 2E-028
     SGFRm Rm29 (11) 36,94 3E-060
     SGFRm Rm70 (2) 31,19 2E-024
     SGFRm Rm30 (1) 30,51 2E-020
     SGFRm Rm31 (1) 26,08 3E-022
     SGFRm Rm67 (3) 20,38 3E-074
     SGFRm Rm85 (2) 11,34 3E-025
     SGFRm Rm479 (1) 23,76 4E-010
acanthoscurrin 1 precursor [A. gomesiana] gi 27524417 156 62,17 SGFAc Ac354 (1) 42,85 3E-014
     SGFRs Rs26 (6) 31,95 2E-019
flagelliform silk protein [A. trifasciata] gi 13561982 1.002 56,78 SGFAc Ac233 (1) 30,47 3E-005
     SGFRm Rm259 (1) 22,22 1E-005
flagelliform silk protein [A. trifasciata] gi 13561980 651 47,31 SGFRm Rm533 (1) 30,91 1E-017
flagelliform silk protein [N.clavipes] gi 2833647 871 46,84 SGFRs Rs54 (3) 33,14 9E-020
     SGFRm Rm35 (1) 20,68 2E-011
     SGFRm Rm36 (1) 22,53 8E-010
     SGFRm Rm32 (3) 25 4E-018
flagelliform silk protein [N.clavipes] gi 7106224 2.249 54,37 SGFRs Rs130 (1) 21,42 4E-004
     SGFRm Rm34 (3) 25,54 7E-012
     SGFRm Rm129 (2) 26,82 5E-012
flagelliform silk protein [N. madagascariensis] gi 7106228 1.884 51,8 SGFRm Rm33 (2) 27,48 3E-021
     SGFRm Rm37 (1) 21,64 7E-011
flagelliform silk protein [N. madagascariensis] gi 7106229 626 47,12 SGFRm Rm76 (2) 17,22 7E-008
     SGFRm Rm197 (1) 25 2E-004
fibroin 2 [D. spinosa] gi 89113990 623 35,63 SGFRs Rs29 (5) 23,92 6E-011
     SGFRm Rm433 (1) 23,8 1E-005
major ampullate spidroin 1 [L. hesperus] gi 89276817 1.065 41,22 SGFRm Rm324 (1) 48,38 1E-019
major ampullate dragline silk protein-2 [Araneus ventricosus] gi 27228959 429 27,03 SGFAc Ac13 (3) 32,46 3E-009
major ampullate spidroin 2-1 [K. hibernalis] gi 47007938 185 47,02 SGFAc Ac15 (1) 35,92 2E-013
     SGFRm Rm381 (1) 22,97 7E-017
     SGFRm Rm418 (1) 21 9E-008
major ampullate spidroin 2-2 [K. hibernalis] gi 47007952 214 49,53 SGFAc Ac14 (1) 32,33 3E-025
      Ac17 (1) 32,09 2E-010
      Ac16 (1) 31,96 1E-014
     SGFRs Rs38 (1) 17,35 1E-010
     SGFRs Rs37 (3) 31,09 6E-018
     SGFRs Rs70 (2) 31,65 1E-022
spidroin 1 [N. clavipes] gi 2911274 544 40,25 SGFRs Rs84 (2) 45,23 2E-004
SPD1_NEPCL Spidroin-1 [Dragline silk fibroin 1] gi 1174414 747 42,3 SGFRm Rm185 (1) 26,25 4E-005
  1. * Computation of glycine content was calculated based on translated consensus sequence
Back to article page

BMC Genomics

ISSN: 1471-2164

Contact us