Table 3 contigs identified to flank or contain gene sequences of interest.
From: A draft physical map of a D-genome cotton species (Gossypium raimondii)
Gene name | Â | Closest Contigs |
|---|---|---|
Cotton fiber genes | Closest Genetic Markers | Â |
Li2 | A1552, Gate4BC11 | ctg1749, ctg2409 |
Li1 | Gate4CA09, Coau1J04 | ctg478, ctg8796, ctg10964, ctg11826 |
N1/Fbl | Gafb28I12, pAR0244, Gafb29C08 | ctg11567, ctg3941, ctg5857, ctg 497, ctg1153, ctg1422, ctg1955, ctg2775, ctg3754, ctg8492, ctg11632, ctg93, ctg4489, ctg12050, ctg10883, ctg7872 |
Other genes and gene families | Probes | Â |
CesA | COV2311, COV2312, COV1269, COV1270 | ctg10763, ctg10561, ctg10858, ctg12310, ctg228 |
GTPB | COV2309, COV2310 | ctg11814, ctg483, ctg669 |
AdhA | COV1992, COV1993, COV1265, COV1266 | ctg10740, ctg11096, ctg11218, ctg11323, ctg12283 |
AdhC | COV1267 | ctg1376 |
AdhD | COV1924, COV1925 | ctg1376, ctg159 |
Arabidopsis trichome genes | Â | Â |
TUA6 | - | ctg1653, ctg3177 |
TTG2 | COV1942 | ctg937 |
ACT2 | COV1933 | ctg908 |
GL2 | - | ctg601 |
FRA1 | COV1932 | ctg6359, ctg1785, ctg59 |
FRA2 | COV1940 | ctg1009, ctg11648 |
GL3 | COV1945 | ctg686, ctg2610 |
GL1 | COV1950 | ctg9085, ctg11801 |
TRY | COV1936 | ctg471, ctg3808 |
SPIKE1 | COV1937 | ctg10915, ctg157, ctg627 |