|
Component
|
D. holocanthus
|
T. rubripes
|
Te. nigroviridis
|
|---|
| |
WG
|
HR-fugu
|
HR-tetra
|
WG
|
HR-Dh
|
WG
|
HR-Dh
|
|---|
|
Bases masked (%)
|
7.94
|
5.16
|
4.87
|
6.89
|
2.43
|
4.66
|
2.93
|
|
Interspersed repeats
|
6.73
|
4.05
|
3.84
|
4.69
|
1.03
|
2.03
|
0.18
|
|
Retroelements
|
6.00
|
3.76
|
3.36
|
3.39
|
0.33
|
1.37
|
0.08
|
|
SINEs
|
2.00
|
1.63
|
1.15
|
0.20
|
0.00
|
0.13
|
0.00
|
|
LINEs
|
3.44
|
2.13
|
2.12
|
2.51
|
0.22
|
1.06
|
0.08
|
|
LTR elements
|
0.55
|
0.00
|
0.00
|
0.68
|
0.11
|
0.19
|
0.00
|
|
DNA transposons
|
0.66
|
0.29
|
0.48
|
1.05
|
0.61
|
0.45
|
0.00
|
|
Rolling-circles
|
0.00
|
0.00
|
0.00
|
0.00
|
0.00
|
0.00
|
0.00
|
|
Unclassified
|
0.07
|
0.00
|
0.00
|
0.25
|
0.09
|
0.21
|
0.10
|
|
Small RNA
|
0.00
|
0.00
|
0.00
|
0.00
|
0.00
|
0.00
|
0.00
|
|
Satellites
|
0.00
|
0.00
|
0.00
|
0.01
|
0.00
|
0.00
|
0.00
|
|
Simple repeats
|
0.75
|
0.68
|
0.75
|
1.75
|
0.93
|
1.96
|
2.34
|
|
Low complexity
|
0.46
|
0.43
|
0.28
|
0.44
|
0.47
|
0.67
|
0.41
|
- WG, sequenced whole genome dataset; HR-fugu, homologous region in the D. holocanthus genome compared with the T. rubripes genome; HR-tetra, homologous region in the D. holocanthus genome compared with the Te. nigroviridis genome; HR-Dh, homologous regions in the smooth pufferfish genomes compared with the D. holocanthus genome.
