Table 1 Distribution of markers
| Â | HapMap SNPs included in GWAS data | Number of markers (start position - end position in Mb) | |||
|---|---|---|---|---|---|
Chromosome |  | Panel based on δ | Panel based on F ST | Panel based on 21 k random markers | Panel based on 2 k random markers |
1 | 55,147 | 167 (0.8-247.2) | 150 (0.8-247.2) | 1,734 (0.7-247.1) | 171 (2.3-245.7) |
2 | 58,091 | 184 (0.6-241.7) | 177 (0.6-241.7) | 1,545 (0.4-242.7) | 155 (0.6-241.0) |
3 | 47,963 | 139 (0.3-199.1) | 132 (0.3-199.1) | 1,376 (0.3-198.9) | 137 (0.4-198.2) |
4 | 43,771 | 139 (2.2-190.9) | 131 (2.2-190.9) | 1,327 (0.3-191.0) | 143 (0.7-187.2) |
5 | 44,805 | 115 (1.0-180.6) | 106 (1.0-180.6) | 1,303 (0.5-180.6) | 133 (0.5-180.4) |
6 | 44,882 | 107 (0.9-170.4) | 95 (0.9-170.4) | 1,182 (0.1-170.8) | 146 (0.2-170.8) |
7 | 37,440 | 112 (1.2-158.5) | 104 (1.2-158.5) | 1,126 (0.2-158.5) | 98 (1.3-157.5) |
8 | 38,149 | 115 (0.3-144.9) | 107 (0.3-144.9) | 1,006 (0.4-146.1) | 97 (1.1-143.1) |
9 | 32,770 | 82 (0.3-140.1) | 76 (0.3-140.1) | 1,003 (0.2-140.2) | 91 (0.9-140.2) |
10 | 37,715 | 105 (0.7-135.2) | 98 (0.7-135.2) | 1,042 (0.7-135.3) | 107 (1.3-130.6) |
11 | 34,812 | 92 (2.6-132.9) | 84 (2.6-132.9) | 965 (0.2-134.5) | 93 (1.9-134.2) |
12 | 33,366 | 87 (0.3-131.1) | 75 (0.3-131.1) | 1,072 (0.1-132.1) | 101 (1.8-129.5) |
13 | 26,886 | 63 (18.9-113.8) | 61 (18.9-113.8) | 824 (18.2-114.1) | 87 (18.2-112.3) |
14 | 22,056 | 68 (19.9-106.3) | 61 (19.9-106.3) | 742 (19.5-105.1) | 70 (19.5-102.9) |
15 | 20,351 | 66 (20.6-99.6) | 59 (20.6-99.6) | 726 (20.3-99.9) | 69 (20.4-99.2) |
16 | 21,527 | 60 (0.9-88.7) | 58 (0.9-86.1) | 776 (0.1-88.6) | 66 (3.0-87.6) |
17 | 16,077 | 53 (0.1-74.5) | 49 (0.1-74.5) | 708 (0.1-78.6) | 76 (0.8-76.0) |
18 | 20,776 | 49 (1.0-75.7) | 46 (1.0-75.7) | 722 (0.3-76.1) | 72 (0.3-75.5) |
19 | 9,560 | 38 (1.6-62.2) | 36 (1.6-63.0) | 488 (0.3-63.7) | 42 (1.0-63.7) |
20 | 18,133 | 52 (0.9-61.2) | 50 (0.9-61.2) | 648 (0.0-62.4) | 60 (0.3-61.5) |
21 | 9,948 | 26 (15.9-45.3) | 24 (15.9-45.3) | 344 (13.3-46.8) | 40 (14.8-46.7) |
22 | 8,831 | 24 (17.0-48.7) | 21 (17.0-48.7) | 415 (15.3-49.5) | 46 (15.3-49.5) |
X | 25,327 | 133 (0.8-154.1) | 123 (2.6-154.1) | 563 (0.1-154.7) | 69 (0.2-152.6) |
Total | 708,383 | 2,076 | 1,923 | 21,637 | 2,169 |