Table 5 Linkage disequilibrium (r2) of intragenic and intergenic pairs of SNP
From: Characteristics of linkage disequilibrium in North American Holsteins
Intergenic | Intragenic | |||||
|---|---|---|---|---|---|---|
Distance (kb) | N | Mean | SD | N | Mean | SD |
< 40 | 13,302 | 0.21 | 0.06 | 2,849 | 0.20 | 0.06 |
40-60 | 7,037 | 0.20 | 0.06 | 1,055 | 0.19 | 0.06 |
60-80 | 4,273 | 0.20 | 0.06 | 516 | 0.21 | 0.06 |
80-100 | 2,716 | 0.20 | 0.06 | 259 | 0.20 | 0.06 |