From: Deep sequencing discovery of novel and conserved microRNAs in trifoliate orange (Citrus trifoliata)
Species | Tissues | Techniques | Redundant reads (× 104) | Unique reads (× 104) | Reference |
---|---|---|---|---|---|
Arabidopsis | Inflorescence and seedling | MPSS | 221.01 | 10.48 | Science, 2005, 309 (5740): 1567-1569 |
 | Mixture materials of all developmental stages | 454-FLX | 88.70 | 34.00 | Genes & Development, 2006, 20 (24): 3407-3425 |
 | Wild-type Arabidopsis inflorescence | MPSS | 72.10 | 6.75 | Genome Research, 2006, 16 (10): 1276-1288 |
 | Inflorescence of rdr2 mutant | MPSS | 91.59 | 1.53 |  |
 | Wild-type Arabidopsis and dcl1-7, dcl2-1 and dcl3-1 mutant | 454-FLX | 47.04 | 21.86 | PLoS ONE, 2007, 2 (2): e219. |
Rice | Inflorescence, shoot and seedling | MPSS | 295.39 | 28.43 | Nature Biotechnology, 2007, 25 (4):473-477 |
 | Mixture materials of all developmental stages | 454-FLX | 9.23 | 1.28 | Nucleic Acids Research, 2007, 35: 829-833 |
 | Wild-type rice seedling | 454-FLX | 71.42 | 5.88 | BMC Plant Biology, 2008, 8: 25 |
 | Seedling treated with salt stress |  |  | 4.30 |  |
 | Seedling treated with drought |  |  | 8.10 |  |
Populus | Leaf | 454-FLX | 4.13 | 0.60 | BMC Genomics, 2007, 8: 481 |
 | Bud |  | 3.56 | 0.63 |  |
Wheat | Mixture of leaf, root and spike | 454-FLX | 26.30 | 25.25 | Genome Biology, 2007, 8 (6): R96 |
Soybean | Wild-type soybean root | 454-FLX | 15.91 | Â | BMC Genomics, 2008, 9: 160 |
 | japonicum-inoculated soybean roots |  | 19.49 |  |  |
Tomato | Fruit Leaf | 454-FLX | 53.70 18.48 | 2.25 10.28 | Genome Research, 2008, 18(10): 1602-1609 |
Maize | Wild-type maize spike | Solexa | 560.00 | Â | Proceedings of the National Academy of Sciences of the USA, 2008, 105 (39): 14958-14963 |
 | mop1-1 mutant |  | 720.00 |  |  |
C. trifoliata | flower buds, flowers, fruits | Solexa | 1310.7 | 487.6 | Â |