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Table 1 Characteristics of the BES-SSR identified

From: Integration of physical and genetic maps of common bean through BAC-derived microsatellite markers

Repeat type Motif1 Total SSR Monomorfic2 Polymorfic
    Class I3 Class II Class I Class II
Di-nucleotide AT/TA 100 20% (20) 3% (3) 67% (67) 10% (10)
  AC/TG 5 40% (2) 20% (1) 40% (2) -
  AG/TC 27 40.7% (11) 7.4% (2) 33.3% (9) 18.5% (5)
Subtotal   132 25% (33) 4.5% (6) 59.1% (78) 11.4% (15)
Tri-nucleotide ATA/TAT 24 16.6% (4) 37.5% (9) 29.2% (7) 16.7% (4)
  AGA/TCT 14 - 35.7% (5) 21.4% (3) 42.8% (6)
  AGC/TCG 2 - 100% (2) - -
  AGT/TCA 3 - 66.7% (2) - 33.3% (1)
  GGT/CCA 1 - 100% (1) - -
Subtotal   44 9.1% (4) 43.2% (19) 22.7% (10) 25% (11)
TOTAL   176 21% (37) 14.2% (25) 50% (88) 14.8% (26)
  1. 1 Di- and tri-nucleotide motifs considered for the polymorphism survey
  2. 2 Percentages and numbers of microsatellites in each SSR class and for each motif which were monomorphic or polymorphic in the survey of the DOR364 × G19833 population parents
  3. 3 Class I: motifs longer than 10 repeats. Class II: motifs shorter than 10 repeats.