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Table 4 Enzymes related to oil accumulation and breakdown in seeds

From: Transcriptome analysis of the oil-rich seed of the bioenergy crop Jatropha curcas L

Symbol Enzyme Unisequences NJD NJG
Fatty Acid Biosynthesis
FatA Acyl-ACP thioesterase A 2 25.95 0
FatB Acyl-ACP thioesterase B 1 1.36 0
ACC Acetyl-CoA carboxylase 4 10.91 0
EAR Enoyl-ACP reductase 2 2.72 1.68
HAD Hydroxyacyl-ACP dehydrase 0 0 0
KAR Ketoacyl-ACP reductase 5 16.36 1.68
KAS I Ketoacyl-ACP synthase I 4 9.54 0
KAS II Ketoacyl-ACP synthase II 2 5.45 1.68
KAS III Ketoacyl-ACP synthase III 0 0 0
MAT Malonyl-CoA ACP transacyclase 1 1.36 0
FAD2 Oleoyl-ACP desaturase 2 9.55 8.43
PCH Palmitoyl-CoA hydrolase 1 0 1.68
SAD Stearoyl-ACP desaturase 1 1.36 0
Triacylglycerol Biosynthesis
LAT 1-Acylglycerol-3-phosphate-O-acyltransferase 1 1.36 0
DGAT Acyl-CoA:diacylglycerol acyltransferase 2 1.36 1.68
GPAT Glycerol-3-phosphate acyltransferase 1 1.36 0
PDAT Phospholipid:diacylglycerol acyltransferase 1 0 1.68
PP Phosphotidate phosphatase 0 0 0
OLE Oleosin 2 4.09 0
Triacylglycerol Degradation
ML Monoacylglycerol lipase 1 1.36 0
PLAS Peroxysomal long-chain acyl-CoA synthetase 5 2.72 21.86
PFAT Peroxisomal fatty acid/acyl-CoA transporter 0 0 0
TL Triacylglycerol lipase 14 21.82 40.45
Fatty Acid Degradation
FADA Acetyl-CoA acyltransferase 6 8.19 106.14
ATOB Acetyl-CoA C-acetyltransferase 2 1.36 1.68
ADH Alcohol dehydrogenase 1 2.72 1.68
ACADM Acyl-CoA dehydrogenase 2 0 6.74
ACOX Acyl-CoA oxidase 4 4.09 10.1
ALDH3A2 Aldehyde dehydrogenase (NAD+) 4 8.19 15.17
DCR Dienoyl-CoA reductase 5 2.72 18.46
PAAG Enoyl-CoA hydratase 12 9.53 47.19
ACSL Long-chain acyl-CoA synthetase 4 2.72 3.36
  1. Number of unisequences assigned to enzymes of metabolic pathways related to oil accumulation and breakdown in the seeds. NJD shows the number of ESTs in JD normalised to 10,000 reads. NJG shows the number of ESTs in JG normalised to 10,000 reads. See additional file 4 for the unisequence names and AC statistics.
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