Table 6 Gene sets detected in the three Affymetrix U133a data sets.
From: Enumerating the gene sets in breast cancer, a "direct" alternative to hierarchical clustering
Uppsala | TRANSBIG | Stockholm |
|---|---|---|
adipose | adipose | adipose |
basal | basal | basal |
estrogen | estrogen | estrogen |
proliferation | proliferation | proliferation |
erbb2 | erbb2 | Â |
immune(0) | immune(0) | immune(0) |
immune(1) | immune(1) | immune(1) |
immune(2) | immune(2) | immune(2) |
immune(3) | Â | Â |
immune(4) | immune(4) | immune(4) |
immune(5) | immune(5) | immune(5) |
immune(6) | immune(6) | Â |
immune(7) | Â | Â |
| Â | immune(10) | Â |
stromal(0) | stromal(0) | stromal(0) |
| Â | stromal(1) | stromal(1) |
stromal(2) | stromal(2) | stromal(2) |
stromal(3) | Â | stromal(3) |
stromal(5) | stromal(5) | stromal(5) |
ribosomal(0) | ribosomal(0) | ribosomal(0) |
ribosomal(1) | Â | ribosomal(1) |
| Â | ribosomal(3) | Â |
| Â | ribosomal(4) | Â |
ribosomal(5) | Â | Â |
metallothioneins | metallothioneins | metallothioneins |
ACTG1 | ACTG1 | ACTG1 |
AFFX-BioC-5_at | AFFX-BioC-5_at | AFFX-BioC-5_at |
CD24 | CD24 | CD24 |
| Â | CD44 | Â |
GAPDH | GAPDH | GAPDH |
GGT1 | GGT1 | GGT1 |
hemoglobin | hemoglobin | hemoglobin |
histone | histone | histone |
PPP1R12A | PPP1R12A | PPP1R12A |
TPSAB1 | TPSAB1 | TPSAB1 |
UBE2D2 | UBE2D2 | UBE2D2 |
NFIB | NFIB | Â |
AFFX-M27830_5 | Â | AFFX-M27830_5 |
LST1 | Â | LST1 |
GNAS | Â | Â |
| Â | NKTR | Â |
| Â | FOXA1 | Â |
| Â | myo | Â |
| Â | CFLAR | Â |
| Â | SMARCA4 | Â |
| Â | TCF4 | Â |
| Â | Â | ezrin |
| Â | Â | OPHN1 |