From: Fragmentation of the large subunit ribosomal RNA gene in oyster mitochondrial genomes
Region | Primer | 5' to 3' oligonucleotide sequence | Product length | Annealing temperature |
---|---|---|---|---|
5' portion | mt168-F * | GGATTCTGTTTGTCCGCAGCATT | 233 bp | 50°C |
 | mt169-R * | CACCATATAGCTATCTTTAGTTGA |  |  |
3' portion | mt89-F * | CAGTACCTGCCCAGTGCGACAA | 494 bp | 58°C |
 | 16SBR * | CCGGTCTGAACTCAGATCACGT |  |  |
full LSU rRNA | dCv-Ai-LSU-f | CTTTWGCAKMATGGCYTTWTGAG | ~773 bp in Cv | 55°C |
 | dCv-Ai-LSU-r | CACGGGGTCTTCTTGTCTWWCTTT | 748 bp in Ai |  |