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Table 5 Frequency and features of the repeat elements identified in A. actinomycetemcomitans

From: Markedly different genome arrangements between serotype a strains and serotypes b or c strains of Aggregatibacter actinomycetemcomitans

Repeat ID Estimated
length
(bp)
Features Frequency
in D7S-1
Genome
Frequency
in HK1651
Genome
Frequency
in D11S-1
Genome
REPEAT01 6505 rRNA genes operon 6 6 6
REPEAT02 1269 IS150 like element 8 7 5
REPEAT03 717 IS200 like element 0 4 5
REPEAT04 139 Unknown 1 5 5
REPEAT05 6326 FHA domain protein 2 0 0
REPEAT06 4315 WD-40 repeat, Hypothetical protein and FHA domain protein 2 0 0
REPEAT07 2156 Sel1 domain protein repeat-containing protein 4 0 0
REPEAT08 2008 Rhs element Vgr protein 6 0 0
REPEAT09 1523 Glycoside hydrolase, family 19 gene 5 0 0
REPEAT10 1254 FHA domain protein 2 0 0
REPEAT11 1227 Tra5 Protein 6 0 0
REPEAT12 1060 IS30 like element 3 0 0
REPEAT13 1225 Translation elongation factor Tu 2 2 2
REPEAT14 837 Putative FHA domain protein 4 0 0
REPEAT15 690 IS427 like element 4 0 0
REPEAT16 472 Sel1 domain protein repeat-containing protein 7 0 0
REPEAT17 387 Hypothetical protein 10 0 0
REPEAT18 219 Unknown 8 4 2
REPEAT19 162 Hypothetical protein 7 1 1
REPEAT20 100 Unknown 7 5 5
REPEAT21 135 Autotransporter adhesin Aae 4 3 2