From: Genomic encyclopedia of sugar utilization pathways in the Shewanella genus
Sugar utilization pathway (subsystem) | Number of genomes | Number of genes | Newly assigned genes | ||||
---|---|---|---|---|---|---|---|
Carbohydrates | Abbrev. | Â | Â | regulation | transport | enzymes | auxiliary |
Central carbon metabolism | CCM | 19 | 21 | - | - | - | - |
N- acetylglucosamine, chitin | Nag | 18 | 15 | nagR | nagP, ompNag | nagBII, nagK , | mcp Nag , nagX |
Glycerate | Grt | 17 | 3 | - | grtP | - | - |
β-glucosides, cellobiose | Bgl | 9 | 8 | bglR | bglT, glcPBglompBgl | glk II | - |
Sucrose | Scr | 8 | 5 | scrR II | scrT II , omp Scr | - | - |
Maltodextrins | Mal | 14 | 13 | malR | malT, glcPMal ompMal(2) | - | - |
Arabinose, arabinosides | Ara | 6 | 18 | araR II | araUVWZ, araT, omp Ara | araM, araY | araX |
Galactose, galactosides | Gal | 8 | 10 | - | galP II, omp Gal | - | - |
Gluconate | Gnt | 4 | 3 | - | - | - | - |
N- acetylgalactosamine | Aga | 4 | 8 | - | agaP, omp Aga | agaA II , agaK, agaS | agaO |
Mannosides | Man | 4 | 14 | manR I , manR II | manP I , manP II , omp Man | manI, manK | - |
Trehalose | Tre | 3 | 6 | treR II | treT, omp Tre | treP | - |
Xylitol | Xlt | 2 | 6 | xltR | xltABC | - | - |
Ribose | Rbs | 2 | 6 | - | - | - | - |
Sialic acids | Nan | 1 | 10 | - | nanP, omp Nan | - | - |
Alginate | Alg | 1 | 6 | algR | algT | - | - |
Mannitol | Mtl | 1 | 5 | mtlR II | mtlP | mtlZ II | mtlX |
Unassigned | - | 19 | 13 | - | - | - | - |
Total number: | 17 | 19 | 170 | 11 | 34 | 12 | 5 |