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Table 1 List of the 26 genes that have similar expression patterns in BMS- and BM+FA-treated embryos.

From: Hif1α down-regulation is associated with transposition of great arteries in mice treated with a retinoic acid antagonist

Gene symbol

Gene name

FC

BMS/untreated controls

FC

BMS+FA/BMS

GO classification

Tmem176b

transmembrane protein 176B

-2.58

-1.08

cellular differentiation

Pcsk5

proprotein convertase subtilisin/kexin type 5

-2.06

-1.08

cardiac development

Ankrd13c

ankyrin repeat domain 13c

-1.58

-1.06

unknown biological process

Slc7a15

solute carrier family 7 member 15

-2.23

-1.12

amino acid transporter

Canx

calnexin

-1.51

-1.07

protein folding

Rab11b

RAB11B, member RAS oncogene family

-1.60

-1.31

signal transduction

Ralbp1

ralA binding protein 1

-1.53

-1.12

signal transduction

Sat1

spermidine/spermine N1-acetyl transferase1

-1.62

-2.28

regulation of cell proliferation

Fn1

fibronectin 1

-1.58

-1.24

cell-matrix adhesion

Pcbp1

poly(rC) binding protein 1

-1.57

-1.59

mRNA processing

Naca

nascent polypeptide-associated complex alpha polypeptide

-1.64

-1.70

regulation of transcription

Rpl39

ribosomal protein L39

1.71

-2.10

translation

Mospd3

motile sperm domain containing 3

-1.92

-1.24

cardiac development

Eif4a1

eukaryotic translation initiation factor 4A1

-1.56

-1.19

translation initiation factor activity

Rps15a

ribosomal protein S15a

-1.77

-2.54

translation

Gpr82

G protein-coupled receptor 82

-1.59

-1.21

G-protein coupled receptor protein signalling pathway

Eif5a

eukaryotic translation initiation factor 5A

-1.81

-1.36

translation initiation factor activity

EG23

4159

predicted gene, EG234159

-1.50

-1.01

unknown

LOC63

3468

similar to H3 histone, family 3B

-1.77

-1.27

unknown

XM_920276

/

-1.58

-3.10

unknown

XM_921367

/

-4.86

-1.00

unknown

OTTMUSG

0000000

4999

predicted gene, OTTMUSG

00000004999

-1.64

-2.14

unknown

XM_980000

/

-1.96

-2.42

unknown

XM_990335

/

-4.16

-1.04

unknown

XR_002657

/

-2.11

-6.27

unknown

  1. Genes in bold have been analysed by qRT-PCR