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Table 4 Comparison of genes represented by the remapped probe sets using different databases

From: Integrating multiple genome annotation databases improves the interpretation of microarray gene expression data

Database A

Database B

Same

Diff

UniqueA

UniqueB

UCSC

Ensembl

3,979

2,329

1,417

60

UCSC

RefSeq

3,551

2,955

1,219

406

UCSC

GenBank

5,442

1,627

656

637

  1. Same: number of genes having the same probe sets in A and B.
  2. Diff: number of genes having different probe sets in A and B.
  3. UniqueA: number of genes having probe sets in A but not in B.
  4. UniqueB: number of genes having probe sets in B but not in A.
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BMC Genomics

ISSN: 1471-2164

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