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Table 4 DNA re-association values as determined by DNA macroarray analysis among Lactobacillus strains

From: Characterization of a novel Lactobacillus species closely related to Lactobacillus johnsonii using a combination of molecular and comparative genomics methods

 

L. intestinalis DSMZ 6629T

L. johnsonii ATCC 33200T

L. crispatus DSMZ 20584T

L. gasseri ATCC 33323T

L. acidophilus CECT 903T

L. taiwanensis BL263

L. murinus BL262

1.95 ± 1.39

3.68 ± 2.29

2.41 ± 0.83

4.82 ± 2.47

1.23 ± 0.07

15.22 ± 4.65

L. reuteri BL259

4.33 ± 4.16

6.04 ± 4.61

3.87 ± 4.17

8.12 ± 4.71

5.93 ± 2.16

4.78 ± 2.07

L. intestinalis DSMZ 6629T

100.00

6.00 ± 1.26

3.66 ± 1.10

4.08 ± 0.86

6.79 ± 2.11

3.52 ± 1.05

L. intestinalis BL260

107.55 ± 4.18

9.90 ± 3.70

7.75 ± 4.33

9.93 ± 4.83

9.77 ± 0.23

7.27 ± 1.86

L. johnsonii ATCC 33200T

7.74 ± 1.49

100.00

5.15 ± 0.70

19.32 ± 1.51

7.57 ± 1.73

20.76 ± 1.32

L. johnsonii CECT 289

10.44 ± 3.74

81.91 ± 8.39

5.45 ± 2.02

23.12 ± 7.98

8.61 ± 3.24

28.28 ± 6.53

L. johnsonii NCC 2822

15.39 ± 8.09

94.25 ± 12.15

1.39 ± 6.29

45.64 ± 4.48

13.81 ± 6.55

35.37 ± 11.93

L. johnsonii NCC 1741

17.57 ± 7.53

91.82 ± 8.88

10.48 ± 6.32

38.06 ± 8.11

10.39 ± 3.73

35.18 ± 9.31

L. johnsonii NCC 533

9.70 ± 5.52

76.78 ± 8.09

9.73 ± 7.20

24.53 ± 8.96

8.31 ± 3.82

24.94 ± 8.71

L. johnsonii NCC 2767

16.00 ± 7.28

106.05 ± 7.91

13.33 ± 8.54

45.02 ± 14.95

11.35 ± 3.62

39.75 ± 11.45

L. johnsonii BL261

7.07 ± 3.58

56.49 ± 8.70

6.04 ± 2.44

19.74 ± 3.73

12.02 ± 10.84

24.15 ± 2.27

L. crispatus DSMZ 20584T

7.34 ± 2.86

6.22 ± 1.06

100.00

4.28 ± 2.06

11.70 ± 5.35

4.20 ± 1.90

L. crispatus BL221

7.14 ± 2.66

6.84 ± 0.86

82.06 ± 10.06

4.88 ± 2.97

8.40 ± 2.87

4.21 ± 1.34

L. gasseri ATCC 33323T

3.99 ± 1.88

15.62 ± 2.19

3.63 ± 1.61

100.00

3.25 ± 0.77

9.89 ± 2.56

L. gasseri NCC 2856

10.56 ± 5.92

31.63 ± 9.46

7.73 ± 3.08

76.31 ± 6.36

6.57 ± 2.36

21.74 ± 6.62

L. gasseri NCC 2857

11.54 ± 6.36

41.76 ± 12.27

11.11 ± 6.48

79.66 ± 15.14

8.73 ± 3.21

25.55 ± 8.95

L. gasseri NCC 2858

8.07 ± 3.82

29.36 ± 9.15

5.98 ± 3.43

71.09 ± 5.46

8.92 ± 4.47

19.56 ± 5.14

L. gasseri BL223

5.06 ± 2.07

21.28 ± 1.75

4.21 ± 1.38

62.11 ± 9.80

3.29 ± 0.88

14.13 ± 2.67

L. acidophilus CECT 903T

8.28 ± 2.65

7.06 ± 0.08

9.84 ± 3.14

6.18 ± 2.42

100.00

4.74 ± 0.80

L. acidophilus CECT 4529

8.59 ± 3.38

6.79 ± 1.73

9.08 ± 3.40

3.68 ± 0.61

98.60 ± 6.52

3.96 ± 1.23

L. acidophilus CECT 4179

7.10 ± 3.61

5.12 ± 1.50

6.72 ± 2.72

3.39 ± 1.61

101.10 ± 2.45

3.96 ± 0.64

L. taiwanensis BL263

7.50 ± 1.18

31.43 ± 6.28

6.98 ± 2.42

22.05 ± 3.10

6.19 ± 1.73

100.00

L. taiwanensis BL301

3.55 ± 0.51

18.20 ± 5.85

3.82 ± 0.34

12.61 ± 2.42

3.26 ± 0.66

72.61 ± 10.45

L. taiwanensis BL302

3.57 ± 1.55

19.56 ± 4.20

3.94 ± 0.88

13.18 ± 0.71

2.56 ± 0.89

94.95 ± 5.69

L. taiwanensis BL303

3.55 ± 0.29

17.65 ± 6.63

3.74 ± 1.00

12.96 ± 2.37

3.23 ± 0.05

86.54 ± 8.38

L. taiwanensis BL304

3.40 ± 0.25

17.31 ± 6.16

3.47 ± 0.75

12.73 ± 2.10

3.57 ± 0.64

75.04 ± 8.82

  1. Values were calculated as percentage of hybridization relative taking as a 100% the hybridization of each strain with itself and they are the means ± SD from three independent hybridization experiments. Intra-specific DNA hybridization values are shown in bold.