Table 5 Prediction results of SVM-Prot by using 117 aaRSs of main dataset.
From: Prediction and classification of aminoacyl tRNA synthetases using PROSITE domains
S.No. | Predicted Result of SVM-Prot | Number of aaRSs |
|---|---|---|
1 | Zinc-binding | 55 |
2 | EC 6.1.-.-: Ligases - Forming Carbon-Oxygen Bonds | 13 |
3 | All DNA-binding | 8 |
4 | Iron-binding | 8 |
5 | EC 2.7.-.-: Transferases - Transferring Phosphorus-Containing Groups | 5 |
6 | Magnesium-binding | 4 |
7 | EC 3.6.-.-: Hydrolases - Acting on Acid Anhydrides | 3 |
8 | All lipid-binding proteins | 3 |
9 | Manganese-binding | 3 |
10 | Metal-binding | 3 |
11 | EC 3.1.-.-: Hydrolases - Acting on Ester Bonds | 2 |
12 | Aptamer-binding protein | 1 |
13 | EC 2.4.-.-: Transferases - Glycosyltransferases | 1 |
14 | EC 5.4.-.-: Isomerases - Intramolecular Transferases | 1 |
15 | Ligases - Forming Carbon-Oxygen Bonds | 1 |
16 | Photosystem II | 1 |
17 | RNA-binding Proteins | 1 |
18 | TC 3.A.5 Type II (general) secretory pathway (IISP) family | 1 |
19 | Transmembrane | 1 |
20 | tRNA-binding Proteins | 1 |
21 | Tyrosine Kinase Receptors | 1 |