Skip to main content

Table 4 Perfect synteny blocks, operons, and their corresponding genomic coverage, size and range in C. elegans.

From: Large synteny blocks revealed between Caenorhabditis elegans and Caenorhabditis briggsae genomes using OrthoCluster

Chromosome

All perfect synteny blocks

Operons

 

Synteny blocks

Coverage (%)

Mean (Kb)

Median (Kb)

Range

(Kb)

Range (genes)

Operons

Coverage (%)

Mean (Kb)

Median (Kb)

Range (Kb)

Range (genes)

I

445

53.4

18.3

13.6

[2.0-102.9]

[2-17]

246

16.5

10.2

8.0

[1.1-81.6]

[2-8]

II

525

47.1

16.0

11.3

[1.0-111.9]

[2-24]

203

11.2

8.4

6.3

[1.6-51.9]

[2-8]

III

442

54.1

18.1

14.5

[0.6-75.8]

[2-20]

264

17.5

9.1

7.6

[1.1-33.0]

[2-7]

IV

525

43.6

16.6

12.4

[1.0-95.7]

[2-20]

196

9.7

8.7

6.9

[1.1-46.7]

[2-7]

V

690

43.3

15.2

9.0

[0.9-201.2]

[2-42]

154

5.6

7.6

5.6

[1.6-41.5]

[2-7]

X

431

65.4

32.4

23.4

[1.0-168.2]

[2-25]

57

2.1

6.5

6.2

[1.7-23.6]

[2-3]

Total

3,058

51.1

18.8

12.7

[0.6-201.2]

[2-42]

1,120

9.8

8.8

6.8

[1.1-81.6]

[2-8]

Back to article page

BMC Genomics

ISSN: 1471-2164

Contact us