Skip to main content

Table 1 In silico promoter analysis of differentially expressed genes 24 hours after TPA stimulation

From: Identification of the Rage-dependent gene regulatory network in a mouse model of skin inflammation

Genes

BF Name

Fischertest P.Val

Corrected P.Val

With PWM cluster

Without PWM cluster

all

Sp1

5.33E-07

1.06E-04

94

3

Sp1 isoform 1

5.33E-07

1.06E-04

94

3

Sp4

1.72E-06

2.27E-04

83

14

AP-2beta

1.24E-06

1.22E-03

77

20

AP-2alpha

1.60E-05

1.27E-03

79

18

AP-2gamma

2.13E-05

1.41E-03

79

18

MAZR

6.03E-05

3.41E-03

74

23

CAC-binding protein

1.32E-04

6.52E-03

81

16

Egr-1

3.56E-04

1.56E-02

85

12

Egr-3

4.38E-04

1.73E-02

78

19

E2F

4.85E-04

1.75E-02

58

39

c-Myc

7.31E-04

2.41E-02

67

30

Egr-2

9.69E-04

2.94E-02

80

17

COUP-TF1

1.06E-03

2.94E-02

89

8

WT1

1.19E-03

2.94E-02

67

30

WT1-isoform1

1.19E-03

2.94E-02

67

30

COUP-TF2

1.45E-03

3.38E-02

48

49

Cluster 1

Sp4

2.01E-06

7.93E-04

40

2

Sp1

6.13E-05

6.86E-03

42

0

Sp1 isoform 1

6.13E-05

6.86E-03

42

0

MAZR

6.93E-05

6.86E-03

36

6

HNF-4alpha7

1.84E-04

1,46E-02

29

13

CAC-binding protein

3.12E-04

2.06E-02

38

4

Cluster 2

MAZR

2.14E-04

7.64E-02

19

1

WT1

5.79E-04

7.64E-02

18

2

WT1-isoform1

5.79E-04

7.64E-02

18

2

Cluster 3

E2F

1.88E-05

7.45E-03

28

8

E2F-1

8.50E-05

1.68E-02

28

8