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Table 1 General annotation information of the 28 plant pathogens

From: DIGAP - a Database of Improved Gene Annotation for Phytopathogens

Species a

Abbreviation

RefSeq

Genomic Length (bp)

G+C content (%)

Annotated ORFs in RefSeq

Acidovorax avenae subsp. citrulli AAC00-1

Aac

NC_008752

5,352,772

68.02

4709

Agrobacterium tumefaciens str. C58

At 58

NC_003062

2,841,580

59.38

2765

Agrobacterium vitis S4

Av 4

NC_011989

4,009,526

57.60

4288

Aster yellows witches'-broom phytoplasma strain AY-WB

Ayw

NC_007716

706,595

26.89

671

Clavibacter michiganensis subsp. michiganensis NCPPB 382

Cmm

NC_009480

3,297,891

72.66

2984

Clavibacter michiganensis subsp. sepedonicus ATCC 33113

Cms

NC_010407

3,258,645

72.60

2941

Candidatus Phytoplasma australiense

Cpa

NC_010544

879,959

27.40

684

Candidatus Phytoplasma mali

Cpm

NC_011047

601,943

21.40

479

Erwinia carotovora subsp. atroseptica SCRI1043

Eca

NC_004547

5,064,019

50.97

4472

Leifsonia xyli subsp. xyli str. CTCB07

Lxx

NC_006087

2,584,158

67.68

2030

Mesoplasma florum L1

MfL

NC_006055

793,224

27.02

682

Onion yellows phytoplasma OY-M

Oyp

NC_005303

860,631

27.74

754

Pseudomonas syringae pv. phaseolicola 1448A

Psp

NC_005773

5,928,787

58.02

4985

Pseudomonas syringae pv. syringae B728a

Pss

NC_007005

6,093,698

59.23

5089

Pseudomonas syringae pv. tomato str. DC3000

Pst

NC_004578

6,397,123

58.40

5476

Ralstonia solanacearum GMI1000

Rs 1000

NC_003295

3,716,416

67.04

3438

Xanthomonas axonopodis pv. citri str. 306

Xac

NC_003919

5,175,554

64.77

4312

Xanthomonas campestris pv. campestris str. 8004

Xcc 8004

NC_007086

5,148,708

64.96

4273

Xanthomonas campestris pv. campestris str. ATCC 33913

Xcc 33913

NC_003902

5,076,188

65.07

4181

Xanthomonas campestris pv. campestris str. B100

Xcc 100

NC_010688

5,079,002

65.00

4467

Xanthomonas campestris pv. vesicatoria str. 85-10

Xcv

NC_007508

5,178,466

64.75

4487

Xanthomonas oryzae pv. oryzae MAFF 311018

Xoo 311018

NC_007705

4,940,217

63.70

4372

Xanthomonas oryzae pv. oryzae KACC10331

Xoo 10331

NC_006834

4,941,439

63.69

4144

Xanthomonas oryzae pv. oryzae PXO99A

Xoo 99A

NC_010717

5,240,075

63.60

4988

Xylella fastidiosa M12

XfM 12

NC_010513

2,475,130

51.90

2104

Xylella fastidiosa M23

XfM 23

NC_010577

2,535,690

51.80

2161

Xylella fastidiosa 9a5c

Xf 9a5c

NC_002488

2,679,306

52.67

2766

Xylella fastidiosa Temecula1

XfT

NC_004556

2,519,802

51.78

2034

  1. a For Agrobacterium tumefaciens str. C58, Ralstonia solanacearum GMI1000, only the largest chromosome are considered.