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Table 2 Comparative genomics data

From: Genome analysis and comparative genomics of a Giardia intestinalis assemblage E isolate

 

P15-WB

P15-GS

WB-GS

Orthologs a

4564

4180

4301

Protein identity

90% (sd. 7)

81% (sd. 10)

78% (sd. 14)

dN b

0.06 (sd. 0.06)

0.13 (sd. 0.09)

0.13 (sd. 0.08)

dS c

0.44 (sd. 1.48)

1.33 (sd. 2.18)

1.30 (sd. 2.15)

dN/dS

0.15 (sd. 0.12)

0.11 (sd. 0.09)

0.11 (sd. 0.09)

  1. a Orthologs refer to positional orthologs. Genes truncated in contig ends are not included.
  2. b The rate of nonsynonymous and nucleotide variation. Calculated using the program yn00.
  3. c The rate of synonymous and nucleotide variation. Calculated using the program yn00.
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BMC Genomics

ISSN: 1471-2164

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