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Table 2 Clusters of differentially expressed genes.

From: Gene expression in a paleopolyploid: a transcriptome resource for the ciliate Paramecium tetraurelia

Experiment

Cluster Name

Number of genes

Autogamy

Early peak

373

 

Early induction

97

 

Intermediate induction

583

 

Late induction

36

 

Early repression

252

 

Late repression

1126

Reciliation

Early peak

264

 

Gradual induction

695

 

Repression

253

Exocytosis

Induced

432

 

Repressed

94

  1. The clusters were determined by hierarchical clustering of differentially expressed genes, as shown in Figure 1 for the autogamy experiment. Note that for the autogamy experiment, the 2467 genes identified using a Treat model fold-change of 2 were used for hierarchical clustering.
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BMC Genomics

ISSN: 1471-2164

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