Skip to main content

Table 1 Summarized data for sequences from multiplex-enriched libraries, for both A. mellifera and D. rerio

From: Representativeness of microsatellite distributions in genomes, as revealed by 454 GS-FLX Titanium pyrosequencing

  Total no. of sequences Length > 80 bp Containing microsatellites Total number of sequences obtained with primer Unique sequences Consensus sequences
D. rerio 2 probes 14789 9813 6758 283 238 45
D. rerio 5 probes 12789 8783 7096 382 346 36
D. rerio 8 probes 15833 10733 9123 333 301 32
A. mellifera 2 probes 22940 14706 11217 138 103 35
A. mellifera 5 probes 22189 14706 10958 166 139 27
A. mellifera 8 probes 27392 20152 16283 237 176 61
   Length > 80 bp/total Containing microsatellites Percentage of sequences obtained with primer   
D. rerio 2 probes   66.4% 68.9% 4.2%   
D. rerio 5 probes   68.7% 80.8% 5.4%   
D. rerio 8 probes   67.8% 85.0% 3.7%   
A. mellifera 2 probes   64.1% 76.3% 1.2%   
A. mellifera 5 probes   66.3% 74.5% 1.5%   
A. mellifera 8 probes   73.6% 80.8% 1.5%