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Table 3 Expression of 1,3-beta-glucanosyltransferase genes present in the A. niger genome

From: An inventory of the Aspergillus niger secretome by combining in silico predictions with shotgun proteomics data

Group

Ordered locus name

Signal peptide prediction

GPI-anchor Prediction**

  

signalP3*

Classifier

 

1

ATCC_53033

An02g03070

Yes

Yes

Yes

Ambiguous

Highly probable

Highly probable

2

An02g09050,

An08g07350

An10g00400

Yes

Yes

Yes

Yes

Yes

Yes

Probable

Highly probable

Highly probable

3

An09g00670

An03g06220

An16g06120

Yes

No

Yes

Yes

Yes

N.A.

Highly probable

Probable

Highly probable

  1. * SignalP3 algorithm [2]
  2. ** using the PredGPI algorithm [25]
  3. Bold and underlined: proteins are detected by mass spectronomy in the secretome enriched fractions
  4. N.A.: Not available, classifier predictions are not valid, because the cluster-size is too small