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Table 2 Significance scores for structure predictions for selected P-DUDES domains

From: A widespread peroxiredoxin-like domain present in tumor suppression- and progression-implicated proteins

PSI-Blast hits in the PDB database
domain First PDB hit (PDB ID) iteration E-value
CCDC80-II 2h01|A, Plasmodium yoelii Thioredoxin Peroxidase I 4 4e-05
CCDC80-I 3drn|A, Sulfolobus sulfataricus Bcp1 6 8e-08
CCDC80-III 2h01|A 3 2e-04
SRPX 3drn|A 4 4e-04
SRPX2 3drn|A 3 0.004
FFAS hits in the PDB database. Z-score below -9.5 means significant similarity (less than 3% of false positives)[27]
domain First PDB hit (PDB ID) Sequence identity Z-score
CCDC80-II 3drn_A 12 -35.5
CCDC80-I 3drn_A 11 -18.6
CCDC80-III 3drn_A 9 -40.1
SRPX 3drn_A 10 -30.3
SRPX2 3drn_A 15 -35.7
HHpred hits in the PDB database
domain First PDB hit (PDB ID) E-value  
CCDC80-II 3drn_A 0.00093  
CCDC80-I 3drn_A 0.00081  
CCDC80-III 2h01_A 1.1E-20  
SRPX 3drn_A 0.0011  
SRPX2 3drn_A 0.00018