PSI-Blast hits in the PDB database | |||
---|---|---|---|
domain | First PDB hit (PDB ID) | iteration | E-value |
CCDC80-II | 2h01|A, Plasmodium yoelii Thioredoxin Peroxidase I | 4 | 4e-05 |
CCDC80-I | 3drn|A, Sulfolobus sulfataricus Bcp1 | 6 | 8e-08 |
CCDC80-III | 2h01|A | 3 | 2e-04 |
SRPX | 3drn|A | 4 | 4e-04 |
SRPX2 | 3drn|A | 3 | 0.004 |
FFAS hits in the PDB database. Z-score below -9.5 means significant similarity (less than 3% of false positives)[27] | |||
domain | First PDB hit (PDB ID) | Sequence identity | Z-score |
CCDC80-II | 3drn_A | 12 | -35.5 |
CCDC80-I | 3drn_A | 11 | -18.6 |
CCDC80-III | 3drn_A | 9 | -40.1 |
SRPX | 3drn_A | 10 | -30.3 |
SRPX2 | 3drn_A | 15 | -35.7 |
HHpred hits in the PDB database | |||
domain | First PDB hit (PDB ID) | E-value | Â |
CCDC80-II | 3drn_A | 0.00093 | Â |
CCDC80-I | 3drn_A | 0.00081 | Â |
CCDC80-III | 2h01_A | 1.1E-20 | Â |
SRPX | 3drn_A | 0.0011 | Â |
SRPX2 | 3drn_A | 0.00018 | Â |