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Table 1 Description of the 49 CNVRs detected in the pig genome

From: Copy number variation in the porcine genome inferred from a 60 k SNP BeadChip

CNVR ID Chr. Start End Length (Kb) Status Number of Animals
1 1 24217581 24340263 122.68 Loss-Gain 13
2 1 45428275 45549702 121.43 Gain 7
3 1 48467320 48606417 139.10 Loss-Gain 24
4 1 65873816 72839149 6965.33 Loss-Gain 50
5 1 84499444 86580142 2080.70 Loss-Gain 101
6 1 102184641 102246547 61.91 Loss-Gain 73
7 1 160653704 161917767 1264.06 Gain 49
8 1 179815713 179914790 99.08 Loss-Gain 197
9 1 181518754 181741363 222.61 Loss-Gain 86
10 1 206491920 206869145 377.23 Loss 12
11 1 222291368 233007189 10715.82 Loss 11
12 1 237242221 237929823 687.60 Gain 8
13 2 11601476 11714214 112.74 Gain 5
14 2 21970642 22174716 204.07 Gain 7
15 2 40533655 41466383 932.73 Loss 270
16 3 56202930 56347970 145.04 Gain 9
17 4 24971805 25077329 105.52 Loss-Gain 39
18 4 33537533 33962195 424.66 Loss-Gain 8
19 4 50569393 51322987 753.59 Gain 14
20 4 119210502 119256548 46.05 Gain 7
21 4 134367793 134519459 151.67 Loss-Gain 21
22 5 23899971 24070933 170.96 Loss-Gain 51
23 5 35733150 37322403 1589.25 Loss-Gain 51
24 5 35933178 36136940 203.76 Gain 12
25 7 77371678 77536074 164.40 Gain 18
26 7 82665585 83053927 388.34 Loss-Gain 18
27 7 97896821 98115996 219.18 Gain 21
28 7 110105319 110156658 51.34 Loss-Gain 11
29 10 4479233 4701713 222.48 Gain 42
30 11 65309203 65381195 71.99 Loss 20
31 11 56381032 57812846 1431.81 Loss-Gain 45
32 13 64352825 64798051 445.23 Loss-Gain 105
33 13 118821556 118923746 102.19 Gain 26
34 14 53301700 55310453 2008.75 Loss-Gain 10
35 14 63834660 63882223 47.56 Loss-Gain 176
36 14 111363926 111540634 176.71 Loss 150
37 14 97526178 99696847 2170.67 Loss-Gain 49
38 15 99843606 100116097 272.49 Loss-Gain 75
39 17 6525429 6635237 109.81 Loss 84
40 8 80936785 81030481 93.70 Loss-Gain 93
41 13 81503361 81601546 98.19 Loss-Gain 118
42 1 130025060 130085466 60.41 Gain 26
43 1 276666775 276786004 119.23 Gain 13
44 5 79779580 79931050 151.47 Gain 34
45 8 35691571 36104826 413.26 Gain 53
46 8 104917016 104968103 51.09 Gain 5
47 11 30072771 30117419 44.65 Loss 38
48 13 94769297 94922644 153.35 Loss 66
49 13 128150975 128360061 209.09 Gain 17
  1. The genomic coordinates are expressed in bp and are relative to the Sus scrofa April 2009 genome sequence assembly (Sscrofa9)