Motifs | Primers designed | Amplified primersa (%) | Polymorphic primersb (%) |
---|---|---|---|
Di-nucleotides | 666 | 591(88.74) | 339(50.90) |
AG | 338 | 306(90.53) | 193(57.10) |
AT | 294 | 254(86.39) | 128(43.54) |
AC | 34 | 31(91.18) | 18(52.94) |
Tri-nucleotides | 164 | 150(91.46) | 92(58.10) |
AAG | 61 | 56(91.80) | 37(60.66) |
ATG | 35 | 33(94.29) | 20(57.14) |
AGG | 18 | 17(94.44) | 8(44.44) |
AAT | 21 | 19(90.48) | 11(52.38) |
AAC | 16 | 14(87.50) | 8(50.00) |
GC-rich TNRs | 13 | 11(84.62) | 8(61.54) |
Tetra-nucleotides | 30 | 29(96.67) | 16(53.33) |
Penta-nucleotides | 30 | 24(80.00) | 13(43.33) |
Total | 890 | 794(89.21) | 460(51.69) |