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Table 4 Top-ranking GO biological process terms for genes DE between high and low marbled muscles

From: Use of a bovine genome array to identify new biological pathways for beef marbling in Hanwoo (Korean Cattle)

GO term/Affymetrix probe identifier Entrez gene accession no Gene Symbol Gene description
Gene more highly expressed in high marbled muscle   
Protein kinase cascade:GO0007243 Bt.21268.1.S2_at 404181 RPS6KB1 Ribosomal protein S6 kinase, 70 kDa, polypeptide 1
Protein catabolic process:GO0006516   
Bt.15675.1.S1_at 286806 ADAMTS4 ADAM metallopeptidase with thrombospondin type 1 motif, 4
Germ cell development:GO0007281 Bt.21268.1.S2_at 404181 RPS6KB1 Ribosomal protein S6 kinase, 70 kDa, polypeptide 1
Cholesterol biosynthetic process:GO0006695   
Bt.621.1.S1_at 505060 CYP51 Cytochrome P450, family 51, subfamily A polypeptide 1
Regulation of Rab GTPase activity:GO0032313   
Bt.21021.1.S1_at 532704 TBC1D7 TBC1 domain family, member 7
Gene more highly expressed in low marbled muscle   
Protein kinase cascade:GO0007243 Bt.21827.2.S1_at 510889 THOP1 Thimet oligopeptidase 1
Peptide metabolic process:GO0006518   
Bt.21827.2.S1_at 510889 THOP1 Thimet oligopeptidase 1