Table 3 Putative sRNAs predicted in silicoa
From: Identification of small RNAs in Francisella tularensis
RNA | Length (nt) | Coordinates | Flanking genes | Genomic contextb | Potential ORFsc |
|---|---|---|---|---|---|
1 | 39 | 599871-599910 | FTL_0609-FTL_0610 | >68|>|984< | - |
2 | 91 | 865504-865595 | FTL_0886-FTL_0887 | <1|>|129> | 1 |
3 | 168 | 1039023-1039191 | FTL_1090-FTL_1091 | <4|>|-32> | 8, 12* |
4 | 141 | 1567719-1567860 | FTL_1636-FTL_1637 | >557|>|488< | 2* |
5 | 41 | 1808414-1808455 | FTL_1875-FTL_1876 | <349|<|203< | 2, 8* |
6 | 89 | 1251973-1252062 | FTL_1313-FTL_1314 | >145|<|47< | - |
7 | 181 | 1240899-1241080 | FTL_1303-FTL_1304 | >26|<|0< | 41 |
8 | 125 | 765395-765520 | FTL_0777-FTL_0778 | >132|<|0> | 2 |
9 | 87 | 508319-508406 | FTL_0527-FTL_0528 | >149|<|0> | - |
10 | 225 | 508181-508406 | FTL_0527-FTL_0528 | >11|<|0> | 52*, 32, 37 |
11 | 191 | 361680-361871 | FTL_0391-FTL_0392 | <476|<|331< | - |
12 | 229 | 133934-134163 | FTL_0131-FTL_0132 | <141|<|29< | 3 |
13 | 92 | 52224-52316 | FTL_0050-FTL_0051 | <54|<|0< | 7*, 2 |
14 | 177 | 37528-37705 | FTL_0035-FTL_0036 | >1|>|209> | 10*, 4, 24*, 2 |
15 | 122 | 359671-359793 | FTL_0389-FTL_0390 | >1|>|176< | 19, 2, 2 |
16 | 390 | 511941-512331 | FTL_0529-FTL_0530 | >1|>|-32< | 9*, 4*, 7, 41, 7, 16* |
17 | 52 | 527019-527071 | FTL_R0021-FTL_0544 | <2|>|8< | - |
18 | 36 | 1251854-1251890 | FTL_1313-FTL_1314 | >26|<|219< | - |
19 | 196 | 1256490-1256686 | FTL_1319-FTL_1320 | >57|>|128< | 8, 9, 13 |
20 | 213 | 1351294-1351507 | FTL_1420-FTL_1421 | >67|<|0< | 11, 19, 24* |
21 | 119 | 1681442-1681561 | FTL_1744-FTL_1745 | <33|<|0< | 15*, 3* |
22 | 292 | 1229654-1229946 | FTL_R0033-FTL_1289 | >2|>|462< | 10, 13*, 2, 11 |
23 | 228 | 49421-49649 | FTL_0046-FTL_0047 | >80|<|49< | 2*, 11, 12*, 20 |
24 | 240 | 765280-765520 | FTL_0777-FTL_0778 | >17|<|0> | 12*, 2, 33* |