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Figure 2 | BMC Genomics

Figure 2

From: Integrated genomics of susceptibility to alkylator-induced leukemia in mice

Figure 2

Mouse Haplotype Map. (A) Typical haplotype block (Block ID 13605, Additional File 1) derived from SNP data http://www.broadinstitute.org/mouse/hapmap/. Rows represent SNPs at the indicated positions on chromosome 4, '=' are untyped. Columns represent 48 classical inbred strains. Mouse Phenome Database strain identifiers are shown for each column. Strain haplotypes are shown on the right. Given the strain haplotypes, it is possible to predict all typed genotypes with at most a single error. The distribution of the number of SNPs (B) and haplotypes (C) per block. (D) SNP-derived haplotype blocks do not tag CNVRs within 250 kb.

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