From: An initial comparative map of copy number variations in the goat (Capra hircus) genome
Species | No. of individuals | aCGH platforms | Mean probe spacing (kb) | Total no. of CNVs | Mean no. of CNVs per individual | Total no. of CNVRs | CNVR mean size (kb) | References |
---|---|---|---|---|---|---|---|---|
Goat | 9 | 385 k oligo aCGH | 6.3 | 161 | 17.9 | 127 | 90.3 | This study |
Cattle | 90 | 385 k oligo aCGH | ~6 | 1,041 | 11.6 | 177 | 158.6 | [51] |
Cattle | 20 | 6.3 million oligo aCGH | 0.4 | - | - | 304 | 72.0 | [52] |
Human | 270 | BAC aCGH2 | - | - | - | 913 | 228.0 | [28] |
Human | 40 | 42 million oligo aCGH | 0.06 | 51,997 | 1300 | - | 2.96 | [34] |
Chimpanzee | 20 | BAC aCGH2 | - | 355 | 17.8 | - | - | [35] |
Macaque | 9 | 385 k oligo aCGH | 6.5 | 214 | 21.4 | 123 | 101.2 | [37] |
Dog | 9 | 385 k oligo aCGH | 4.73 | 155 | 17.2 | 60 | 309.5 | [45] |
Mouse | 211 | 385 k oligo aCGH | ~5 | 80 | 2-385 | - | 271.5 | [39] |
Mouse | 201 | 2.1 million oligo aCGH | 1 | 10,681 | 26.4-48.35 | 3,359 | 64.0 | [54] |
Rat | 3 | 385 k oligo aCGH | ~54 | 33 | 11 | 33 | 256.0 | [43] |
Chicken | 10 | 385 k oligo aCGH | 2.6 | 96 | 9.6 | - | 166.7 | [78] |