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Table 5 Comparative testing results of POLYAR, polya_svm and polyadq programs on 19600 intronic sequences

From: POLYAR, a new computer program for prediction of poly(A) sites in human sequences

Programs

TN

FP

Total5

SN 6

POLYAR, All1

4581

15019

31998

23.92%

   PAS-strong2

11837

7763

9695

60.39%

   PAS-weak3

9172

10428

14900

46.80%

   PAS_less4

5080

14520

29870

25.92%

polya_svm

13139

6461

8688

67.04%

polyadq

16744

2856

3291

85.43%

  1. 1-6 See Table 4.