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Table 2 Comparison of microarray and RT-PCR analysis of selected genes, differentially regulated during Cr (VI) stress in rice

From: Transcriptomic and metabolomic shifts in rice roots in response to Cr (VI) stress

Locus ID Description Microarray (Log2) RT-PCR (Log2)
LOC_Os07g33780 PDR-like ABC transporter, putative, expressed 14.07 33.59 ± 0.25
LOC_Os08g30770 ABC transporter, ATP-binding protein, putative, expressed 9.3 12.84 ± 3.31
LOC_Os01g50100 ABC transporter, ATP-binding protein, putative, expressed 57.54 93.05 ± 0.009
LOC_Os04g13210 Multidrug resistance-associated protein 4, putative, expressed 22.92 20.11 ± 0.06
LOC_Os06g03560 Oligopeptide transporter 9, putative, expressed 3.63 3.83 ± 0.08
LOC_Os04g50940 Peptide transporter PTR2, putative, expressed 9.39 3.83 ± 0.24
LOC_Os01g52130 Sulfate transporter 3.5, putative, expressed 13.22 16.45 ± 0.04
LOC_Os01g41810 Cytochrome P450 72A1, putative, expressed 71.1 139.10 ± 0.08
LOC_Os02g36030 Cytochrome P450 76C2, putative, expressed 41.12 448.82 ± 0.08
LOC_Os01g43740 Cytochrome P450 72A1, putative, expressed 39.85 80.45 ± 0.15
LOC_Os03g12500 Cytochrome P450 74A2, putative, expressed 30.15 120.26 ± 0.002
LOC_Os01g41820 Cytochrome P450 72A1, putative, expressed 26.32 182.28 ± 0.2
LOC_Os03g55240 Cytochrome P450 81E1, putative, expressed 23.35 87.43 ± 0.18
LOC_Os06g45960 Cytochrome P450 CYP99A1, putative, expressed 22.74 171.25 ± 0.27
LOC_Os01g37750 Glutathione S-transferase GSTU6, putative, expressed 74.43 347.29 ± 0.56
LOC_Os10g38350 Glutathione S-transferase GSTU6, putative, expressed 16.85 4.96 ± 0.03
LOC_Os10g38495 Glutathione S-transferase GSTU6, putative, expressed 15.23 74.02 ± 0.19
LOC_Os10g38610 Glutathione S-transferase GSTU6, putative, expressed 12.61 15.24 ± 0.03
LOC_Os01g72150 Glutathione S-transferase, putative, expressed 14.75 30.06 ± 0.13
LOC_Os03g16920 Heat shock cognate 70 kDa protein (DnaK family protein), putative, expressed 63.42 2683.69 ± 12.4
LOC_Os05g38530 Heat shock cognate 70 kDa protein (DnaK family protein), putative, expressed 12.71 5.43 ± 0.81
LOC_Os03g16030 17.4 kDa class I heat shock protein 3, putative, expressed 12.56 7.88 ± 0.09