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Table 1 The predicted LAB secretomes (genomes included in the original LaCOG analysis 43 are marked by *).

From: LAB-Secretome: a genome-scale comparative analysis of the predicted extracellular and surface-associated proteins of Lactic Acid Bacteria

  

Secretome proteins (%)

 

LAB species and strains

Total proteins

A

B

C

D

E

F

G

Total

(%)

E.faecalis_V583

3186

2.32

1.26

3.36

0.97

0.16

1.6

0.13

9.8

L.acidophilus_NCFM

1834

2.24

0.65

4.09

0.93

0

2.45

0.05

10.41

L.gasseri_ATCC_33323*

1733

1.85

0.69

3.92

0.52

0.12

0.69

0

7.79

L.johnsonii_NCC_533*

1789

2.07

0.89

4.3

0.56

0.39

0.06

0

8.27

L.delbrueckii_bulgaricus

_ATCC11842

1536

1.56

0.13

3.45

1.04

0.07

2.02

0

8.27

L.delbrueckii_bulgaricus

_ATCC_BAA-365*

1681

1.43

0.06

3.15

0.95

0.18

2.08

0

7.85

L.casei_ATCC_334*

2693

1.63

0.78

3.79

0.78

0.15

1.41

0.07

8.61

L.casei_BL23

2973

1.68

0.77

3.4

0.84

0

1.35

0.13

8.17

L.salivarius_UCC118

1973

0.91

0.25

3.4

0.61

0.15

1.27

0.1

6.69

L.sakei_23K

1845

1.52

0.33

3.36

0.76

0.05

2.06

0.27

8.35

L.plantarum_WCFS1*

2981

1.61

1.11

3.99

0.91

0.3

0.1

0

8.02

L.brevis_ATCC_367

2178

1.29

0.55

3.35

1.52

0.14

2.53

0.09

9.47

L.fermentum_IFO_3956

1826

0.66

0.22

2.96

0.55

0

1.15

0.05

5.59

L.helveticus_DPC_4571

1597

1.38

0.13

4.51

0.44

0

2.13

0

8.59

L.reuteri_F275_JGI

1881

0.74

0.21

3.67

0.85

0

1.01

0

6.48

L.reuteri_F275_Kitasato

1803

0.78

0.28

3.55

1

0

1.22

0

6.83

L._lactis_cremoris_MG1363

2393

1.46

0.46

3.01

0.79

0

1.96

0

7.68

L.lactis_cremoris_SK11*

2459

1.38

0.41

3.17

1.02

0.12

1.67

0.08

7.85

L.lactis_lactis_IL1403*

2284

1.4

0.61

4.29

0.74

0.04

1.62

0.18

8.88

L.citreum_KM20

1784

0.06

0.28

4.43

1.23

1.23

0

0.06

7.29

S.thermophilus_CNRZ1066*

1872

1.28

0.05

3.47

0.53

0.27

0.43

0.05

6.08

S.thermophilus_LMD-9*

1669

1.5

0.24

3.89

0.54

0.18

0.84

0

7.19

S.thermophilus_LMG_18311

1854

1.29

0.11

3.78

0.54

0.49

0.65

0

6.86

L.mesenteroides_ATCC_8293*

1966

0.1

0.31

4.93

1.12

0.31

1.22

0.15

8.14

O.oeni_PSU-1*

1664

0.12

0.06

4.33

0.9

1.56

0

0.06

7.03

P.pentosaceus_ATCC_25745*

1727

1.1

0.17

3.88

0.35

0.17

0.98

0.12

6.77

  1. A: Lipid anchored; B: LPxTG Cell-wall anchored; C: N-terminally anchored (No cleavage site); D: N-terminally anchored (with cleavage site); E: Secreted via minor pathways (bacteriocin) (no cleavage site); F: Extracellular (with cleavage site); G: C-terminally anchored (with cleavage site)
  2. The SCL prediction was made by LocateP.