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Table 1 The predicted LAB secretomes (genomes included in the original LaCOG analysis 43 are marked by *).

From: LAB-Secretome: a genome-scale comparative analysis of the predicted extracellular and surface-associated proteins of Lactic Acid Bacteria

   Secretome proteins (%)  
LAB species and strains Total proteins A B C D E F G Total
(%)
E.faecalis_V583 3186 2.32 1.26 3.36 0.97 0.16 1.6 0.13 9.8
L.acidophilus_NCFM 1834 2.24 0.65 4.09 0.93 0 2.45 0.05 10.41
L.gasseri_ATCC_33323* 1733 1.85 0.69 3.92 0.52 0.12 0.69 0 7.79
L.johnsonii_NCC_533* 1789 2.07 0.89 4.3 0.56 0.39 0.06 0 8.27
L.delbrueckii_bulgaricus
_ATCC11842
1536 1.56 0.13 3.45 1.04 0.07 2.02 0 8.27
L.delbrueckii_bulgaricus
_ATCC_BAA-365*
1681 1.43 0.06 3.15 0.95 0.18 2.08 0 7.85
L.casei_ATCC_334* 2693 1.63 0.78 3.79 0.78 0.15 1.41 0.07 8.61
L.casei_BL23 2973 1.68 0.77 3.4 0.84 0 1.35 0.13 8.17
L.salivarius_UCC118 1973 0.91 0.25 3.4 0.61 0.15 1.27 0.1 6.69
L.sakei_23K 1845 1.52 0.33 3.36 0.76 0.05 2.06 0.27 8.35
L.plantarum_WCFS1* 2981 1.61 1.11 3.99 0.91 0.3 0.1 0 8.02
L.brevis_ATCC_367 2178 1.29 0.55 3.35 1.52 0.14 2.53 0.09 9.47
L.fermentum_IFO_3956 1826 0.66 0.22 2.96 0.55 0 1.15 0.05 5.59
L.helveticus_DPC_4571 1597 1.38 0.13 4.51 0.44 0 2.13 0 8.59
L.reuteri_F275_JGI 1881 0.74 0.21 3.67 0.85 0 1.01 0 6.48
L.reuteri_F275_Kitasato 1803 0.78 0.28 3.55 1 0 1.22 0 6.83
L._lactis_cremoris_MG1363 2393 1.46 0.46 3.01 0.79 0 1.96 0 7.68
L.lactis_cremoris_SK11* 2459 1.38 0.41 3.17 1.02 0.12 1.67 0.08 7.85
L.lactis_lactis_IL1403* 2284 1.4 0.61 4.29 0.74 0.04 1.62 0.18 8.88
L.citreum_KM20 1784 0.06 0.28 4.43 1.23 1.23 0 0.06 7.29
S.thermophilus_CNRZ1066* 1872 1.28 0.05 3.47 0.53 0.27 0.43 0.05 6.08
S.thermophilus_LMD-9* 1669 1.5 0.24 3.89 0.54 0.18 0.84 0 7.19
S.thermophilus_LMG_18311 1854 1.29 0.11 3.78 0.54 0.49 0.65 0 6.86
L.mesenteroides_ATCC_8293* 1966 0.1 0.31 4.93 1.12 0.31 1.22 0.15 8.14
O.oeni_PSU-1* 1664 0.12 0.06 4.33 0.9 1.56 0 0.06 7.03
P.pentosaceus_ATCC_25745* 1727 1.1 0.17 3.88 0.35 0.17 0.98 0.12 6.77
  1. A: Lipid anchored; B: LPxTG Cell-wall anchored; C: N-terminally anchored (No cleavage site); D: N-terminally anchored (with cleavage site); E: Secreted via minor pathways (bacteriocin) (no cleavage site); F: Extracellular (with cleavage site); G: C-terminally anchored (with cleavage site)
  2. The SCL prediction was made by LocateP.