LAB-Secretome: a genome-scale comparative analysis of the predicted extracellular and surface-associated proteins of Lactic Acid Bacteria

Table 2 Overview of the LaCOGs (genomes included in the original LaCOG analysis 43 are marked by *).

LAB species and strains	Secretome size	Proteins in LaCOG	Distant Homologs	ORFans	LaCOGs
E.faecalis V583	281	232	22	27	131
L.acidophilus NCFM	171	161	2	8	108
L.brevis ATCC 367	177	154	5	18	113
L.casei ATCC 334 *	192	187	3	2	148
L.casei BL23	205	197	0	8	153
L.citreum KM20	112	112	0	0	93
L.delbrueckii bulgaricus ATCC BAA-365 *	115	113	0	2	94
L.delbrueckii bulgaricus ATCC11842	87	79	3	5	68
L.fermentum IFO 3956	112	112	0	0	89
L.gasseri ATCC 33323 *	115	113	0	2	88
L.helveticus DPC 4571	131	123	2	6	97
L.johnsonii NCC 533 *	236	209	6	21	131
L.lactis cremoris MG1363	105	103	0	2	86
L.lactis cremoris SK11 *	105	105	0	0	87
L.lactis lactis IL1403 *	136	114	4	18	80
L.mesenteroides ATCC 8293 *	112	94	5	13	77
L.plantarum WCFS1 *	160	151	5	4	123
L.reuteri F275 JGI	159	156	1	2	124
L.reuteri F275 Kitasato	171	156	2	13	123
L.sakei 23K	114	103	4	7	80
L.salivarius UCC118	135	126	3	6	103
O.oeni PSU-1 *	95	90	0	5	70
P.pentosaceus ATCC 25745 *	99	89	1	9	79
S.thermophilus CNRZ1066 *	90	90	0	0	77
S.thermophilus LMD-9 *	97	94	1	2	84
S.thermophilus LMG 18311	94	94	0	0	81

ISSN: 1471-2164