Figure 3

The physical map and bin-map of the 128 chromosome segment substitution lines (CSSLs). (A) The physical map of the CSSLs was constructed with molecular markers. Each row represented a CSSL and each column represented a molecular marker locus. The black areas indicate regions that were homozygous for Nipponbare alleles; the white areas indicate regions homozygous for 9311 alleles. (B) The physical map of the CSSLs constructed by whole-genome resequencing. The blue areas indicate regions that are homozygous for Nipponbare alleles; the white areas indicate regions that are homozygous for 9311 alleles. (C) Bin-map of the CSSLs. The blue areas indicate regions that are homozygous for Nipponbare alleles; the red areas indicate regions homozygous for 9311 alleles.