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Table 1 Summary of the markers used to develop the CSSLs.

From: Developing high throughput genotyped chromosome segment substitution lines based on population whole-genome re-sequencing in rice (Oryza sativa L.)

Chromosome Markers Polymorphic markers
  SSR InDel Total Number Percentage Density (Mb)
1 44 43 87 36 41.4 1.21
2 36 20 56 23 41.1 1.56
3 52 12 64 21 32.8 1.73
4 43 30 73 24 32.9 1.47
5 48 30 78 21 26.9 1.42
6 40 30 70 24 34.3 1.30
7 40 20 60 22 36.7 1.35
8 43 20 63 16 25.4 1.77
9 26 5 31 13 41.9 1.77
10 35 20 55 18 32.7 1.27
11 19 31 50 18 36.0 1.58
12 34 18 52 18 34.6 1.53
Total 460 279 739 254 34.4 1.46