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Table 4 Chromosome coverage of substituted segments in the CSSLs.

From: Developing high throughput genotyped chromosome segment substitution lines based on population whole-genome re-sequencing in rice (Oryza sativa L.)

Chr Length Times Coverage length Coverage rate
  MM-map GR-map MM-map GR-map MM-map GR-map MM-map GR-map
1 104.16 157.27 2.39 3.49 42.39 41.23 97.2% 91.5%
2 99.90 166.78 2.78 4.53 32.78 35.24 91.3% 95.7%
3 83.20 114.56 2.29 3.07 32.93 35.30 90.5% 94.8%
4 66.00 108.95 1.87 3.04 35.20 35.86 100.0% 100.0%
5 72.61 122.71 2.44 4.08 29.90 29.86 100.0% 99.4%
6 108.25 106.60 3.47 3.32 30.00 29.56 95.8% 92.0%
7 55.35 59.31 1.86 1.95 27.00 28.92 90.9% 95.3%
8 56.60 125.19 2.00 4.39 24.76 27.62 87.5% 96.8%
9 65.46 73.09 2.84 3.07 21.23 22.98 92.3% 96.4%
10 47.07 65.41 2.06 2.76 15.27 14.05 66.7% 59.4%
11 82.33 104.22 2.89 3.38 28.50 29.42 100.0% 95.4%
12 41.25 66.40 1.50 2.39 21.39 26.36 77.8% 95.0%
Genome 882.18 1270.48 2.37 3.32 341.40 356.41 91.7% 93.3%