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Table 1 General features of NRG857c genome and other E. coli strains

From: Genome sequence of adherent-invasive Escherichia coli and comparative genomic analysis with other E. coli pathotypes

     Chromosome Plasmid(s)
Strain Serotype Pathotype Phylogroup Accession No. Size (kb) Total CDS CDS density (%) G+C (%) Total tRNAs Accession No. Size (kb)
NRG857c O83:H1 AIEC B2 CP001855 4,748 4,431 88.2 50.7 84 CP001856 147
LF82 O83:H1 AIEC B2 CU651637 4,773 4,312 87.7 50.7 84 CU638872 108
E2348/69 O127:H6 EPEC B2 FM180568 4,965 4,703 88.2 50.6 92 FM180569 FM180570 97, 6
UTI89   UPEC B2 CP000243 5,065 5,066 91.1 50.6 88 CP000244 114
CFT073 O6:K2:H1 UPEC B2 AE014075 5,231 5,473 91.9 50.5 89   
536 O6:K15:H31 UPEC B2 CP000247 4,938 4685 88.7 50.5 81   
APEC-O1 O1:K1:H7 APEC B2 CP000468 5,082 4,467 87.5 50.6 94 DQ381420 DQ517526 241, 174, 105, 46
O157 Sakai O157:H7 EHEC E BA000007 5,498 5,361 88.1 50.5 105 AB011548 AB011549 92, 3
MG1655 (K-12) OR:H48:K- Commensal A U00096 4,639 4,294 89.0 50.8 88   
HS O9 Commensal A CP000802 4,643 4,478 88.7 50.8 88   
E24377A O139:H28 ETEC B1 CP000800 4,979 4,873 88.6 50.6 91 CP000795- CP000799 CP000801 79, 74, 70, 34, 6, 5