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Table 4 Predicted invasion and adhesion factors in NRG857c

From: Genome sequence of adherent-invasive Escherichia coli and comparative genomic analysis with other E. coli pathotypes

Locus Tag Protein Ortholog in: Function Identity (%) SPAAN Pad-Value
Invasion
NRG857_06210 putative transcriptional regulator SMS-3-5 putative invasion gene expression up-regulator SirB 99 NA
NRG857_06250 hypothetical protein SMS-3-5 putative invasin 93 0.44
NRG857_12485 putative intimin or invasin protein (SivH-like) UMN026 putative intimin attaching and effacing protein or invasin protein (sivH-like) 96 NA
NRG857_13980 dinucleoside polyphosphate hydrolase O157:H7 EDL933 putative invasion protein 100 0.12
NRG857_21885 invasion protein IbeA SMS-3-5 invasion protein IbeA 93 0.35
Adhesion
NRG857_00700 putative fimbrial-like adhesin protein UTI89 putative fimbrial-like adhesin protein 90 0.83
NRG857_00705 protein YadK ED1a protein yadK, putative fimbrial-like adhesin 95 0.79
NRG857_00710 putative fimbrial-like adhesin protein YadL S88 putative fimbrial-like adhesin protein YadL 80 0.87
NRG857_00715 putative fimbrial-like adhesin protein YadM ED1a putative fimbrial-like adhesin protein YadM 100 0.86
NRG857_00730 predicted fimbrial-like protein S88 putative fimbrial-like adhesin exported protein 95 0.87
NRG857_00985 lipoprotein involved with copper homeostasis and adhesion UTI89 lipoprotein involved with copper homeostasis and adhesion 99 0.62
NRG857_01440 putative adhesin S88 putative adhesin 95 0.91
NRG857_01490 putative autotransporter S88 Putative adhesin; putative outer membrane autotransporter barrel 82 0.91
NRG857_03200 hypothetical protein K-12 substr. W3110 predicted fimbrial-like adhesin protein 95 0.26
NRG857_04950 PgaD putative PGA biosynthesis protein K-12 substr. MG1655 required for biofilm adhesin polysaccharide PGA synthesis 88 NA
NRG857_04960 PgaB outer membrane N-deacetylase K-12 substr. MG1655 biofilm adhesin polysaccharide PGA export lipoprotein with a polysaccharide deacetylase activity needed for export 94 NA
NRG857_04965 outer membrane protein PgaA K-12 substr. MG1655 biofilm adhesin polysaccharide PGA export, predicted OM protein 94 NA
NRG857_05015 DNA-binding transcriptional regulator CsgD K-12 substr. DH10B DNA-binding transcriptional regulator of adhesion determinants 87 0.25
NRG857_05965 hypothetical protein 536 Putative adhesin 100 0.59
NRG857_06960 putative autotransported outer membrane protein involved in cell adhesion S88 putative autotransported outer membrane protein involved in cell adhesion 78 0.96
NRG857_07415 predicted fimbrial protein-like protein UTI89 putative fimbrial adhesin FmlD precursor 93 0.90
NRG857_07420 predicted fimbrial protein-like protein IAI1 putative fimbrial-like adhesin exported protein 89 0.74
NRG857_07425 fimbrial-like adhesin protein APEC O1 fimbrial-like adhesin protein 98 0.74
NRG857_08345 Hypothetical protein SE11 putative adhesin 98 0.66
NRG857_09925 hypothetical protein SE11 putative adhesin 95 NA
NRG857_10700 putative exported fimbrial-like adhesin protein UTI89 putative Yeh fimbiral adhesin YehA precursor 91 0.81
NRG857_10715 putative fimbrial-like adhesin protein ED1a putative fimbrial-like adhesin protein 89 0.82
NRG857_10720 hypothetical protein APEC O1 putative fimbrial-like adhesin protein 100 0.33
NRG857_11325 adhesin O157:H7 str. EC4115 putative outer membrane autotransporter adhesin 78 0.95
NRG857_11815 putative exported fimbrial-like adhesin protein S88 putative exported fimbrial-like adhesin protein 92 0.76
NRG857_11820 fimbrial-like protein YfcQ precursor S88 putative fimbrial-like adhesin exported protein 99 0.83
NRG857_11825 hypothetical protein S88 putative fimbrial-like adhesin exported protein 96 0.57
NRG857_11840 putative fimbrial-like adhesin protein S88 fimbrial-like adhesin protein 76 0.78
NRG857_15155 putative fimbrial protein S88 putative fimbrial-like adhesin protein 100 0.75
NRG857_15170 putative fimbrial adhesin UTI89 putative Yqi fimbrial adhesin 95 0.84
NRG857_16975 putative fimbrial-like adhesin protein AufG ED1a putative fimbrial-like adhesin protein AufG 94 0.62
NRG857_17635 LpfE protein precursor O26:H11 str. 11368 putative fimbrial adhesin protein 86 0.68
NRG857_17920 putative haemagglutinin/Invasin CFT073 putative adhesin 87 0.98
NRG857_21795 type 1 fimbiral adhesin FimH APEC O1 type 1 fimbrial adhesin FimH 100 0.95
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