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Table 1 Beijing strain clinical isolates from South Africa subjected to whole-genome sequencing.

From: The non-clonality of drug resistance in Beijing-genotype isolates of Mycobacterium tuberculosis from the Western Cape of South Africa

Strain ID Origin (hospital) Sub-lineage Family Cluster DR type Combined resistance profiles determined by DST Combined sensitivity profiles determined by DST
R1207 George 1 F31 R86 MDR INH, RIF EMB
X132 Khayelitsha 1 F31 R86 pre-XDR INH,RIF,AMI,CAP,STR,KAN ETH,OFL,EMB
X28 Dysselsdorp 1 F31 R86 XDR INH,RIF,AMI,CAP,OFL,STR, KAN ETH, EMB
R1746 Mossel Bay 1 F31 R86 MDR INH, RIF EMB
X156 Brooklyn Chest 1 F31 R86 pre-XDR INH,RIF, AMI,CAP,STR,KAN ETH,OFL,EMB
X85 George 1 F31 R86 XDR INH,RIF, AMI,OFL,KAN,ETH CAP,EMB
R1909 Worcester 6 F29 R220 MDR INH,RIF,EMB  
R1842 George 6 F29 R220 Mono INH RIF, EMB
X122 Huguenot 6 F29 R220 pre-XDR INH,RIF,OFL ETH,AMI,EMB
R1390 Stellenbosch 6 F29 R220 Mono INH RIF,EMB
X189 Victoria Hos. 6 F29 R220 XDR INH,RIF,AMI,CAP, OFL,KAN, ETH,STR
R1505 George 6 F29 R220 MDR INH, RIF EMB
R1441 George 6 F29 R220 Mono INH RIF,EMB
X29 Retreat 6 F29 R220 pre-XDR INH,RIF,AMI,STR,KAN EMB,OFL,CAP,ETH
  1. INH = isoniazid RIF = rifampicin STR = streptomycin EMB = ethambutol ETH = ethionamide AMI = amikacin KAN = kanamycin CAP = capreomycin OFL = ofloxacin