Table 2 Sequencing statistics on Beijing genotype strains from South Africa.
strain ID | Cluster | completion | coverage | SNPs* | indels* |
|---|---|---|---|---|---|
R1207 | R86 | 98.77% | 66.9x | 689 | 58 |
X132 | R86 | 98.71% | 40.3x | 671 | 61 |
X28 | R86 | 98.35% | 57.6x | 681 | 51 |
R1746 | R86 | 98.26% | 50.8x | 665 | 49 |
X156 | R86 | 98.69% | 106.4x | 799 | 57 |
X85 | R86 | 98.78% | 97.7x | 714 | 60 |
R1909 | R220 | 98.94% | 32.8x | 297 | 54 |
R1842 | R220 | 99.15% | 58.2x | 324 | 49 |
X122 | R220 | 98.60% | 64.1x | 299 | 41 |
R1390 | R220 | 98.50% | 31.3x | 273 | 44 |
X189 | R220 | 98.85% | 87.6x | 392 | 42 |
R1505 | R220 | 98.55% | 29.0x | 267 | 39 |
R1441 | R220 | 99.03% | 82.7x | 295 | 35 |
X29 | R220 | 99.17% | 82.0x | 315 | 41 |