Skip to main content

Table 2 Sequencing statistics on Beijing genotype strains from South Africa.

From: The non-clonality of drug resistance in Beijing-genotype isolates of Mycobacterium tuberculosis from the Western Cape of South Africa

strain ID Cluster completion coverage SNPs* indels*
R1207 R86 98.77% 66.9x 689 58
X132 R86 98.71% 40.3x 671 61
X28 R86 98.35% 57.6x 681 51
R1746 R86 98.26% 50.8x 665 49
X156 R86 98.69% 106.4x 799 57
X85 R86 98.78% 97.7x 714 60
R1909 R220 98.94% 32.8x 297 54
R1842 R220 99.15% 58.2x 324 49
X122 R220 98.60% 64.1x 299 41
R1390 R220 98.50% 31.3x 273 44
X189 R220 98.85% 87.6x 392 42
R1505 R220 98.55% 29.0x 267 39
R1441 R220 99.03% 82.7x 295 35
X29 R220 99.17% 82.0x 315 41
  1. *The number of SNPs and indels are assessed relative to HN878.